C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00030H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021975-ENSDARG00000021827 CGP 7955 20:23837124-23858390
GeneTranscriptPositionBiotype
ENSDARG00000021827 (katna1)
katanin p60 (ATPase-containing) subunit A 1 		ENSDART00000043316 (katna1-001) 23842957-23858390 protein_coding
ENSDARG00000021975 (ginm1)
glycoprotein integral membrane 1 		ENSDART00000032393 (ginm1-001) 23837124-23842907 protein_coding
ENSDART00000153309 (ginm1-002) 23837154-23837996 retained_intron
CIL_00030H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000055211-ENSG00000186625 CGP 9606 6:149566294-149648972
GeneTranscriptPositionBiotype
ENSG00000055211 (GINM1)
glycoprotein integral membrane 1 		ENST00000367419 (GINM1-001) 149566294-149591748 protein_coding
ENST00000433539 (GINM1-002) 149578923-149582283 protein_coding
ENSG00000186625 (KATNA1)
katanin p60 (ATPase containing) subunit A 1 		ENST00000335643 (KATNA1-002) 149594873-149648735 protein_coding
ENST00000335647 (KATNA1-001) 149594873-149638592 protein_coding
ENST00000367411 (KATNA1-201) 149594877-149648804 protein_coding
ENST00000420200 (KATNA1-005) 149603364-149648972 protein_coding
ENST00000444282 (KATNA1-004) 149601640-149648751 protein_coding
ENST00000470620 (KATNA1-003) 149598268-149648693 processed_transcript
ENST00000481905 (KATNA1-007) 149598053-149603373 processed_transcript
ENST00000494504 (KATNA1-006) 149597130-149623111 processed_transcript
ENSG00000202343 (SNORA2)
Small nucleolar RNA SNORA2/SNORA34 family 		ENST00000365473 (SNORA2.1-202) 149594625-149594759 snoRNA
ENSG00000207292 (Y_RNA)
Y RNA 		ENST00000384562 (Y_RNA.1-724) 149631437-149631549 misc_RNA
ENSG00000220848 (RPS18P9)
ribosomal protein S18 pseudogene 9 		ENST00000482817 (RPS18P9-001) 149594084-149594543 processed_pseudogene
ENSG00000233330 (RP1-12G14.7)
 ENST00000419134 (RP1-12G14.7-001) 149591755-149592663 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030H_0001ENSDARG00000021827ENSDART00000043316ENSDARG00000021975ENSDART00000032393ENSDART00000153309CIL_00030H_0002ENSG00000055211ENST00000367419ENST00000433539ENSG00000186625ENST00000335643ENST00000335647ENST00000367411ENST00000420200ENST00000444282ENST00000470620ENST00000481905ENST00000494504ENSG00000202343ENST00000365473ENSG00000207292ENST00000384562ENSG00000220848ENST00000482817ENSG00000233330ENST00000419134
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030H_0001ENSDARG00000021827ENSDART00000043316ENSDARG00000021975ENSDART00000032393CIL_00030H_0002ENSG00000055211ENST00000367419ENSG00000186625ENST00000335643ENST00000335647ENST00000367411ENST00000420200ENST00000444282ENST00000481905ENST00000494504ENSG00000202343ENST00000365473ENSG00000207292ENST00000384562ENSG00000220848ENST00000482817ENSG00000233330ENST00000419134
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000021827 ENSDART00000043316 N/A N/A N/A 0.636±0.15 N/A N/A 1.761±0.14 3.099±2.76 0.283±0.00 N/A 0.808±0.00 N/A N/A N/A
ENSDARG00000021975 ENSDART00000032393 N/A N/A N/A 61.426±23.48 N/A N/A 47.732±17.04 40.682±10.44 4.986±0.00 N/A 6.604±0.00 N/A N/A N/A
ENSDART00000153309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000055211 ENST00000367419 30.094±0.00 18.732±0.00 5.595±0.00 7.926±5.28 14.786±7.63 14.852±11.57 10.047±6.49 16.343±11.56 7.723±1.56 12.674±8.09 8.889±6.03 16.592±7.20 24.695±3.48 31.161±1.52
ENST00000433539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186625 ENST00000335643 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.970±0.00 N/A N/A N/A N/A
ENST00000335647 N/A N/A N/A 1.357±0.00 N/A 0.496±0.00 0.264±0.12 N/A 0.892±0.25 1.315±0.00 N/A 5.039±0.27 1.852±0.50 N/A
ENST00000367411 6.086±0.00 6.077±0.00 1.019±0.00 2.434±0.00 3.209±2.91 7.794±0.00 3.113±0.00 5.662±0.00 N/A 4.000±0.00 2.498±0.00 8.038±1.88 2.667±0.26 19.824±5.60
ENST00000420200 N/A N/A N/A N/A 3.091±0.00 N/A 0.316±0.00 N/A 4.778±0.00 0.793±0.00 N/A 37.750±0.00 9.893±0.00 57.350±0.00
ENST00000444282 N/A N/A N/A N/A N/A 0.864±0.00 0.666±0.00 N/A 1.461±0.00 0.469±0.00 N/A 2.876±0.00 3.106±0.00 N/A
ENST00000470620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481905 N/A N/A N/A N/A N/A N/A 0.564±0.00 N/A N/A N/A 1.256±0.00 N/A N/A N/A
ENST00000494504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 51.456±0.00 14.593±0.00 84.113±0.00
ENSG00000202343 ENST00000365473 0.959±0.00 0.243±0.00 N/A 0.239±0.00 0.355±0.00 N/A 1.887±0.00 N/A N/A 2.652±0.00 2.534±0.00 6.951±0.00 0.361±0.00 0.734±0.62
ENSG00000207292 ENST00000384562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.671±0.00
ENSG00000220848 ENST00000482817 3.732±0.00 3.126±0.00 1.148±0.00 0.951±0.49 3.604±0.48 2.366±0.00 1.116±0.00 1.919±0.00 1.054±0.06 3.141±1.48 1.686±0.38 3.398±1.38 1.829±0.39 2.349±0.15
ENSG00000233330 ENST00000419134 1.179±0.00 0.921±0.00 N/A 0.617±0.00 0.196±0.00 0.271±0.00 0.417±0.12 1.412±0.35 0.468±0.00 0.457±0.00 0.134±0.00 1.661±1.45 0.659±0.41 2.067±0.00

Loading