C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00032B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109062-ENSG00000109065 CGP 9606 17:74748652-74776367
GeneTranscriptPositionBiotype
ENSG00000109062 (SLC9A3R1)
solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 		ENST00000262613 (SLC9A3R1-001) 74748652-74769353 protein_coding
ENST00000413388 (SLC9A3R1-002) 74762003-74769296 protein_coding
ENST00000578958 (SLC9A3R1-004) 74763030-74768559 retained_intron
ENST00000581356 (SLC9A3R1-005) 74763428-74768803 nonsense_mediated_decay
ENST00000583369 (SLC9A3R1-006) 74748652-74768582 protein_coding
ENSG00000109065 (NAT9)
N-acetyltransferase 9 (GCN5-related, putative) 		ENST00000357814 (NAT9-001) 74770547-74776331 protein_coding
ENST00000577428 (NAT9-008) 74772275-74776361 processed_transcript
ENST00000578798 (NAT9-009) 74772031-74776351 retained_intron
ENST00000578822 (NAT9-010) 74771695-74776298 protein_coding
ENST00000578862 (NAT9-014) 74772175-74776337 retained_intron
ENST00000578947 (NAT9-028) 74772903-74776093 protein_coding
ENST00000579218 (NAT9-027) 74771794-74776331 protein_coding
ENST00000579837 (NAT9-015) 74775360-74776336 retained_intron
ENST00000580216 (NAT9-017) 74772238-74776304 processed_transcript
ENST00000580301 (NAT9-003) 74770567-74776339 protein_coding
ENST00000580632 (NAT9-026) 74771558-74775707 protein_coding
ENST00000581136 (NAT9-025) 74771389-74776324 protein_coding
ENST00000581451 (NAT9-029) 74773609-74776128 protein_coding
ENST00000581466 (NAT9-018) 74772272-74774099 protein_coding
ENST00000581762 (NAT9-031) 74771625-74772469 retained_intron
ENST00000582118 (NAT9-011) 74773354-74776345 retained_intron
ENST00000582168 (NAT9-012) 74772994-74776351 retained_intron
ENST00000582359 (NAT9-030) 74772673-74776323 retained_intron
ENST00000582524 (NAT9-022) 74771764-74776365 protein_coding
ENST00000582870 (NAT9-016) 74771660-74776323 protein_coding
ENST00000582993 (NAT9-019) 74773311-74776367 retained_intron
ENST00000583476 (NAT9-024) 74771768-74776337 protein_coding
ENST00000583689 (NAT9-021) 74772777-74776367 retained_intron
ENST00000583757 (NAT9-023) 74771728-74776342 protein_coding
ENST00000583834 (NAT9-005) 74770581-74776323 retained_intron
ENST00000583989 (NAT9-013) 74772266-74776345 processed_transcript
ENST00000584022 (NAT9-004) 74771691-74776331 nonsense_mediated_decay
ENST00000584409 (NAT9-007) 74772295-74776367 processed_transcript
ENST00000585240 (NAT9-020) 74772442-74776345 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_00032B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020733-ENSMUSG00000015542 CGP 10090 11:115163341-115187859
GeneTranscriptPositionBiotype
ENSMUSG00000015542 (Nat9)
N-acetyltransferase 9 (GCN5-related, putative) 		ENSMUST00000103038 (Nat9-002) 115182832-115187332 protein_coding
ENSMUST00000103039 (Nat9-005) 115182832-115187355 protein_coding
ENSMUST00000103040 (Nat9-001) 115182832-115187390 protein_coding
ENSMUST00000103041 (Nat9-003) 115182832-115187844 protein_coding
ENSMUST00000127419 (Nat9-009) 115184795-115187859 processed_transcript
ENSMUST00000134399 (Nat9-004) 115184794-115187842 processed_transcript
ENSMUST00000134769 (Nat9-006) 115184978-115187276 processed_transcript
ENSMUST00000137843 (Nat9-008) 115184604-115187081 processed_transcript
ENSMUST00000153796 (Nat9-007) 115184500-115187262 processed_transcript
ENSMUSG00000020733 (Slc9a3r1)
solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1 		ENSMUST00000021077 (Slc9a3r1-001) 115163341-115181181 protein_coding
ENSMUSG00000045980 (Tmem104)
transmembrane protein 104 		ENSMUST00000061450 (Tmem104-004) 115187487-115247023 protein_coding
ENSMUST00000100235 (Tmem104-001) 115187487-115247023 protein_coding
ENSMUST00000135536 (Tmem104-003) 115187511-115197403 processed_transcript
ENSMUST00000156230 (Tmem104-002) 115187551-115245764 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00032B_0001ENSG00000109062ENST00000262613ENST00000413388ENST00000578958ENST00000581356ENST00000583369ENSG00000109065ENST00000357814ENST00000577428ENST00000578822ENST00000579218ENST00000580301ENST00000580632ENST00000581136ENST00000581762ENST00000582524ENST00000583476ENST00000583757ENST00000583834ENST00000585240CIL_00032B_0002ENSMUSG00000015542ENSMUST00000103038ENSMUST00000103040ENSMUST00000103041ENSMUST00000134769ENSMUST00000137843ENSMUST00000153796ENSMUSG00000020733ENSMUST00000021077ENSMUSG00000045980ENSMUST00000061450ENSMUST00000100235ENSMUST00000156230
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109062 ENST00000262613 9.392±0.00 14.867±0.00 14.357±0.00 37.917±34.61 16.292±14.61 6.366±1.30 1.462±1.04 66.854±44.03 48.998±47.83 21.227±0.00 N/A 17.422±10.98 32.550±11.82 17.232±9.95
ENST00000413388 5.852±0.00 N/A N/A 5.142±0.00 1.301±0.00 3.607±1.04 0.872±0.37 N/A N/A 3.973±0.00 1.376±0.00 15.393±15.79 6.312±0.00 14.275±2.85
ENST00000578958 N/A N/A N/A N/A N/A N/A 0.837±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000581356 N/A N/A N/A 7.993±0.00 1.875±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583369 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.572±0.00 0.870±0.00 N/A N/A N/A
ENSG00000109065 ENST00000357814 2.620±0.00 4.292±0.00 N/A 1.556±0.00 N/A 1.871±0.00 N/A 6.205±0.00 3.414±0.00 1.621±0.00 N/A 8.018±4.90 4.551±0.00 1.498±0.00
ENST00000577428 N/A N/A N/A N/A N/A N/A N/A N/A 0.772±0.00 N/A N/A N/A N/A N/A
ENST00000578798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.987±0.00 N/A N/A N/A
ENST00000578862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.776±0.00 9.143±0.00 10.493±0.00
ENST00000579837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580301 0.894±0.00 3.393±0.00 N/A 1.103±0.59 1.337±0.32 1.690±0.87 1.041±0.89 N/A 1.757±1.47 2.932±0.00 2.021±0.00 8.329±0.00 5.857±2.08 6.306±0.00
ENST00000580632 N/A N/A N/A N/A N/A N/A 0.243±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000581136 N/A N/A 1.095±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.950±0.00 N/A 12.155±0.00
ENST00000582118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582524 N/A N/A N/A N/A 2.741±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583476 N/A N/A N/A N/A N/A 3.400±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583757 N/A N/A N/A N/A 3.037±0.00 N/A N/A 1.484±0.00 3.093±0.00 N/A N/A 10.091±0.00 N/A N/A
ENST00000583834 1.419±0.00 4.617±0.00 N/A 0.652±0.00 1.112±0.00 N/A 0.765±0.00 N/A 0.233±0.00 2.592±0.00 N/A 5.059±0.50 N/A N/A
ENST00000583989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585240 N/A N/A 1.243±0.00 4.396±0.00 N/A 4.190±0.00 0.820±0.00 N/A N/A 3.733±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015542 ENSMUST00000103038 4.171±1.13 1.929±0.13 3.951±0.00 2.757±1.89 1.859±0.26 3.879±0.62 1.850±0.32 3.719±0.80 2.525±0.83 3.780±1.29 1.392±0.83 6.006±4.70 6.478±4.23 20.815±0.00
ENSMUST00000103039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000103040 6.525±1.48 4.247±2.11 5.973±0.09 3.101±0.93 2.309±0.29 7.104±1.04 4.017±1.50 9.207±2.13 7.102±3.16 7.399±1.38 4.113±1.62 4.804±0.81 6.637±1.82 18.368±6.42
ENSMUST00000103041 4.915±1.27 2.560±0.45 N/A 7.169±6.04 4.384±1.21 4.609±1.51 3.129±0.45 3.215±0.27 3.053±0.00 4.147±0.00 1.154±0.00 9.493±4.39 18.118±14.91 41.539±4.41
ENSMUST00000127419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134769 N/A N/A N/A 21.188±0.00 N/A N/A N/A N/A N/A N/A N/A 17.750±4.34 20.995±10.55 60.198±0.00
ENSMUST00000137843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.191±0.38 N/A N/A
ENSMUST00000153796 3.074±0.00 N/A 4.328±0.00 N/A 6.450±0.00 N/A N/A N/A 4.350±0.80 N/A 1.760±0.00 6.306±0.60 N/A N/A
ENSMUSG00000020733 ENSMUST00000021077 11.186±5.56 6.499±0.98 33.561±5.00 13.622±0.77 24.302±4.11 89.697±9.03 3.217±1.15 107.765±2.78 56.340±17.00 24.520±2.56 1.347±0.58 29.084±1.51 83.723±40.37 11.230±3.88
ENSMUSG00000045980 ENSMUST00000061450 4.692±0.72 7.345±0.65 2.706±0.47 1.788±0.04 2.911±1.12 3.818±0.81 1.436±0.29 2.893±0.33 1.471±0.55 3.464±0.53 1.021±0.41 4.148±1.16 5.223±3.13 0.654±0.47
ENSMUST00000100235 N/A N/A N/A N/A 1.060±0.17 N/A N/A 0.514±0.00 0.183±0.00 N/A N/A 1.543±0.04 2.351±0.00 0.257±0.22
ENSMUST00000135536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156230 4.662±1.73 4.779±0.69 0.799±0.30 1.330±0.21 4.435±1.73 1.803±0.72 1.616±0.50 2.163±0.45 1.322±0.62 4.266±0.26 0.716±0.30 5.006±1.81 7.254±3.99 3.350±0.91

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