C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00034B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158411-ENSG00000185414 CGP 9606 2:99161427-99197626
GeneTranscriptPositionBiotype
ENSG00000158411 (MITD1)
MIT, microtubule interacting and transport, domain containing 1 		ENST00000289359 (MITD1-001) 99169263-99181058 protein_coding
ENST00000409107 (MITD1-004) 99169445-99181050 protein_coding
ENST00000413710 (MITD1-005) 99173401-99181027 processed_transcript
ENST00000422537 (MITD1-009) 99161947-99180927 protein_coding
ENST00000438121 (MITD1-002) 99173347-99181035 nonsense_mediated_decay
ENST00000464685 (MITD1-003) 99169263-99180962 retained_intron
ENST00000466880 (MITD1-006) 99170535-99178335 processed_transcript
ENST00000483721 (MITD1-008) 99169266-99170905 retained_intron
ENST00000487588 (MITD1-007) 99161427-99171405 processed_transcript
ENSG00000185414 (MRPL30)
mitochondrial ribosomal protein L30 		ENST00000338148 (MRPL30-001) 99181079-99197626 protein_coding
ENST00000409145 (MRPL30-005) 99181186-99195089 protein_coding
ENST00000409841 (MRPL30-003) 99186176-99197423 nonsense_mediated_decay
ENST00000465432 (MRPL30-002) 99181211-99197399 processed_transcript
ENST00000473743 (MRPL30-004) 99181152-99195178 processed_transcript

Homo sapiens Ensembl (GRCh38)

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CIL_00034B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026088-ENSMUSG00000026087 CGP 10090 1:37874801-37898535
GeneTranscriptPositionBiotype
ENSMUSG00000026087 (Mrpl30)
mitochondrial ribosomal protein L30 		ENSMUST00000027256 (Mrpl30-001) 37890477-37898535 protein_coding
ENSMUST00000160082 (Mrpl30-003) 37891828-37893984 processed_transcript
ENSMUST00000161694 (Mrpl30-002) 37890533-37893246 retained_intron
ENSMUST00000162513 (Mrpl30-004) 37897256-37898125 processed_transcript
ENSMUSG00000026088 (Mitd1)
MIT, microtubule interacting and transport, domain containing 1 		ENSMUST00000027257 (Mitd1-001) 37878729-37890411 protein_coding
ENSMUST00000127170 (Mitd1-004) 37878988-37881868 processed_transcript
ENSMUST00000131754 (Mitd1-005) 37878890-37880118 processed_transcript
ENSMUST00000138806 (Mitd1-003) 37881929-37890276 retained_intron
ENSMUST00000139725 (Mitd1-002) 37874801-37890407 protein_coding
ENSMUSG00000037216 (Lipt1)
lipoyltransferase 1 		ENSMUST00000041621 (Lipt1-001) 37872206-37877387 protein_coding
ENSMUST00000128085 (Lipt1-002) 37871738-37875343 protein_coding
ENSMUST00000142670 (Lipt1-003) 37872374-37875460 protein_coding
ENSMUST00000144440 (Lipt1-004) 37872562-37875554 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034B_0001ENSG00000158411ENST00000289359ENST00000409107ENST00000413710ENST00000422537ENST00000438121ENST00000464685ENST00000466880ENST00000483721ENST00000487588ENSG00000185414ENST00000338148ENST00000409145ENST00000409841ENST00000465432ENST00000473743CIL_00034B_0002ENSMUSG00000026087ENSMUST00000027256ENSMUST00000160082ENSMUST00000161694ENSMUST00000162513ENSMUSG00000026088ENSMUST00000027257ENSMUST00000127170ENSMUST00000131754ENSMUST00000138806ENSMUST00000139725ENSMUSG00000037216ENSMUST00000041621ENSMUST00000128085ENSMUST00000142670ENSMUST00000144440
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034B_0001ENSG00000158411ENST00000289359ENST00000409107ENSG00000185414ENST00000338148ENST00000409145ENST00000409841ENST00000465432CIL_00034B_0002ENSMUSG00000026087ENSMUST00000027256ENSMUSG00000026088ENSMUST00000027257ENSMUST00000127170ENSMUST00000131754ENSMUST00000138806ENSMUST00000139725ENSMUSG00000037216ENSMUST00000041621ENSMUST00000142670ENSMUST00000144440
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158411 ENST00000289359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.694±13.02 12.487±4.53 N/A
ENST00000409107 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.993±0.00 N/A N/A N/A N/A
ENST00000413710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185414 ENST00000338148 5.644±0.00 10.155±0.00 2.754±0.00 7.341±1.63 5.992±1.64 7.314±0.00 5.467±3.23 14.495±0.00 3.242±0.42 4.226±0.00 5.502±3.32 12.232±4.82 6.501±1.18 8.139±0.00
ENST00000409145 N/A N/A N/A 24.214±0.00 N/A N/A 7.826±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000409841 N/A N/A N/A 7.613±0.00 6.459±0.00 8.376±3.41 3.765±0.78 5.270±0.00 5.255±0.86 6.606±0.37 2.461±0.00 15.055±0.00 4.902±0.00 N/A
ENST00000465432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.310±0.00 N/A N/A N/A
ENST00000473743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026087 ENSMUST00000027256 31.789±5.43 38.645±2.34 45.565±9.83 39.134±7.26 24.850±5.50 18.246±1.75 47.009±11.60 30.009±4.16 37.076±14.69 9.714±0.86 69.608±7.83 22.459±11.86 36.661±9.78 20.303±2.55
ENSMUST00000160082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026088 ENSMUST00000027257 2.768±0.54 1.207±0.00 9.124±4.46 2.042±0.62 2.384±0.60 2.844±0.63 0.934±0.34 2.962±0.69 7.153±4.47 2.806±0.15 0.584±0.20 3.075±1.23 14.248±5.20 0.484±0.13
ENSMUST00000127170 N/A N/A 5.442±0.00 1.837±0.13 3.919±0.83 N/A N/A N/A 5.813±0.61 3.378±0.00 N/A 4.548±0.62 10.159±0.71 N/A
ENSMUST00000131754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.670±0.00 N/A N/A
ENSMUST00000138806 N/A N/A N/A 1.370±0.00 N/A N/A N/A N/A N/A N/A N/A 2.044±0.00 N/A N/A
ENSMUST00000139725 N/A 2.456±0.30 N/A 0.976±0.00 N/A 2.091±0.83 N/A N/A N/A N/A 0.757±0.21 3.195±1.06 N/A 0.630±0.21
ENSMUSG00000037216 ENSMUST00000041621 1.274±0.32 0.506±0.11 2.017±0.28 0.813±0.04 0.936±0.32 0.710±0.17 0.635±0.04 1.113±0.25 1.646±0.56 1.054±0.08 0.758±0.29 1.425±0.48 1.892±0.29 0.659±0.11
ENSMUST00000128085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.893±0.00
ENSMUST00000144440 N/A N/A N/A N/A N/A N/A 1.658±0.42 1.042±0.00 1.785±0.00 N/A N/A 1.699±0.00 N/A 0.905±0.08

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