C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein L30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000338148 MRPL30-001 ENSG00000185414 9606 + 2:99181079-99197626 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000338148
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000338148 5.644±0.00 10.155±0.00 2.754±0.00 7.341±1.63 5.992±1.64 7.314±0.00 5.467±3.23 14.495±0.00 3.242±0.42 4.226±0.00 5.502±3.32 12.232±4.82 6.501±1.18 8.139±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034B CIL_00034B_0001 CGP 2:99161427-99197626
CIL_00034A CIL_00034A_0001 CGP 2:99181079-99255282

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005840 IEA ribosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108492 Hif3a-002 protein_coding Mus_musculus 0.000004 58
ENSMUST00000146436 Accs-004 retained_intron Mus_musculus 0.00005 55

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