C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003BI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178460-ENSG00000261787 CGP 9606 8:66870749-66962590
GeneTranscriptPositionBiotype
ENSG00000245910 (SNHG6)
small nucleolar RNA host gene 6 (non-protein coding)
ENST00000520348 (SNHG6-005) 66921684-66925541 lincRNA
ENST00000520619 (SNHG6-004) 66922018-66926398 lincRNA
ENST00000520944 (SNHG6-003) 66921818-66925596 lincRNA
ENST00000521127 (SNHG6-007) 66922271-66925541 retained_intron
ENST00000521399 (SNHG6-006) 66921987-66925541 lincRNA
ENSG00000261787 (TCF24)
transcription factor 24
ENST00000563496 (TCF24-001) 66946501-66962590 protein_coding
ENST00000566129 (TCF24-002) 66947590-66955117 processed_transcript
CIL_0003BI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046101-ENSMUSG00000099032 CGP 10090 1:9908638-9967932
GeneTranscriptPositionBiotype
ENSMUSG00000093178 (Snord87)
small nucleolar RNA, C/D box 87
ENSMUST00000175437 (Snord87-201) 9942463-9942549 snoRNA
ENSMUSG00000099032 (Tcf24)
transcription factor 24
ENSMUST00000097824 (Tcf24-201) 9960171-9962809 protein_coding
ENSMUST00000185184 (Tcf24-001) 9960163-9967932 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BI_0001ENSG00000245910ENST00000520348ENST00000520619ENST00000520944ENST00000521127ENST00000521399ENSG00000261787ENST00000563496ENST00000566129CIL_0003BI_0002ENSMUSG00000093178ENSMUST00000175437ENSMUSG00000099032ENSMUST00000097824ENSMUST00000185184
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BI_0001ENSG00000245910ENST00000520348ENST00000520944ENST00000521127ENST00000521399ENSG00000261787ENST00000563496ENST00000566129CIL_0003BI_0002ENSMUSG00000093178ENSMUST00000175437ENSMUSG00000099032ENSMUST00000097824ENSMUST00000185184
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000245910 ENST00000520348 N/A N/A N/A N/A 1.149±0.00 N/A N/A N/A N/A N/A N/A 18.195±3.00 2.864±0.00 N/A
ENST00000520619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520944 40.803±0.00 47.085±0.00 3.487±0.00 46.287±31.22 20.971±15.59 27.480±21.50 9.791±4.60 10.871±5.77 10.578±2.82 19.229±11.96 37.007±22.23 64.993±47.79 16.529±7.48 29.393±15.04
ENST00000521127 N/A 8.549±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.132±0.00 N/A N/A
ENST00000521399 34.683±0.00 46.728±0.00 N/A N/A 23.307±0.00 37.432±0.00 26.777±0.00 28.507±0.00 21.281±0.00 64.597±0.00 68.270±0.00 54.583±0.00 17.743±0.05 35.388±0.00
ENSG00000261787 ENST00000563496 0.005±0.00 N/A N/A 0.045±0.00 N/A 0.020±0.00 0.203±0.17 0.148±0.00 0.008±0.00 0.004±0.00 N/A 0.019±0.00 0.017±0.00 0.332±0.11
ENST00000566129 N/A N/A 0.437±0.00 N/A 0.013±0.00 0.025±0.00 0.094±0.00 N/A N/A N/A 0.509±0.00 0.037±0.00 N/A 0.226±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000093178 ENSMUST00000175437 N/A N/A N/A 112.429±0.00 N/A N/A N/A N/A N/A N/A N/A 113.547±0.00 377.607±0.00 N/A
ENSMUSG00000099032 ENSMUST00000097824 0.114±0.00 N/A 0.099±0.03 0.136±0.07 0.406±0.28 0.181±0.00 0.069±0.04 1.598±0.11 1.227±1.24 N/A 0.025±0.01 0.829±0.09 0.630±0.41 0.284±0.05
ENSMUST00000185184 0.229±0.24 5.237±1.99 N/A 0.112±0.12 0.388±0.22 0.200±0.07 0.045±0.03 1.369±0.77 2.343±1.99 0.472±0.04 0.018±0.00 1.988±1.67 1.709±1.47 0.649±0.40

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