C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003D1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000095587-ENSG00000077147 CGP 9606 10:96364606-96587452
GeneTranscriptPositionBiotype
ENSG00000077147 (TM9SF3)
transmembrane 9 superfamily member 3 		ENST00000371142 (TM9SF3-001) 96518109-96587052 protein_coding
ENST00000443638 (TM9SF3-003) 96551311-96587452 protein_coding
ENST00000464654 (TM9SF3-005) 96553024-96577542 processed_transcript
ENST00000475401 (TM9SF3-004) 96576345-96586759 processed_transcript
ENST00000485093 (TM9SF3-006) 96522277-96528173 processed_transcript
ENST00000490192 (TM9SF3-002) 96543601-96552943 processed_transcript
ENSG00000095587 (TLL2)
tolloid-like 2 		ENST00000357947 (TLL2-001) 96364606-96513911 protein_coding
ENST00000469598 (TLL2-002) 96395193-96513918 processed_transcript
ENST00000506028 (TLL2-003) 96373113-96375361 retained_intron
ENSG00000235677 (NPM1P26)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 26 		ENST00000426339 (NPM1P26-001) 96560185-96560922 processed_pseudogene
CIL_0003D1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025013-ENSMUSG00000025016 CGP 10090 19:41083981-41264004
GeneTranscriptPositionBiotype
ENSMUSG00000025013 (Tll2)
tolloid-like 2 		ENSMUST00000025986 (Tll2-201) 41083981-41206774 protein_coding
ENSMUST00000169941 (Tll2-202) 41083981-41206774 protein_coding
ENSMUSG00000025016 (Tm9sf3)
transmembrane 9 superfamily member 3 		ENSMUST00000025989 (Tm9sf3-201) 41210842-41264004 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003D1_0001ENSG00000077147ENST00000371142ENST00000443638ENST00000464654ENST00000475401ENST00000485093ENST00000490192ENSG00000095587ENST00000357947ENST00000469598ENST00000506028ENSG00000235677ENST00000426339CIL_0003D1_0002ENSMUSG00000025013ENSMUST00000025986ENSMUST00000169941ENSMUSG00000025016ENSMUST00000025989
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003D1_0001ENSG00000077147ENST00000371142ENST00000443638ENST00000464654ENSG00000095587ENST00000357947ENST00000469598ENST00000506028ENSG00000235677ENST00000426339CIL_0003D1_0002ENSMUSG00000025013ENSMUST00000025986ENSMUST00000169941ENSMUSG00000025016ENSMUST00000025989
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077147 ENST00000371142 29.646±0.00 20.130±0.00 7.539±0.00 16.264±5.59 25.569±3.51 30.495±5.36 8.828±4.83 20.953±9.38 18.404±1.98 19.477±6.78 4.809±2.61 27.896±8.96 17.320±7.31 20.764±6.42
ENST00000443638 N/A N/A N/A N/A N/A N/A N/A 35.272±0.00 36.006±0.00 N/A 6.030±0.00 59.474±8.65 57.670±0.00 21.194±0.00
ENST00000464654 N/A N/A 40.650±0.00 20.438±0.00 N/A 76.792±0.00 N/A N/A N/A 36.078±0.00 N/A N/A N/A N/A
ENST00000475401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000095587 ENST00000357947 0.028±0.00 0.168±0.00 N/A 0.522±0.25 0.031±0.01 0.036±0.00 0.478±0.00 0.031±0.00 0.052±0.00 0.017±0.00 0.235±0.00 0.038±0.01 0.057±0.02 0.056±0.03
ENST00000469598 0.087±0.00 0.158±0.00 N/A N/A 0.184±0.00 0.185±0.03 2.660±0.00 0.131±0.00 0.042±0.00 0.131±0.01 0.213±0.00 0.221±0.12 0.357±0.25 0.534±0.08
ENST00000506028 N/A 0.130±0.00 0.076±0.00 N/A N/A N/A N/A N/A 0.011±0.00 0.046±0.00 N/A N/A N/A 0.150±0.00
ENSG00000235677 ENST00000426339 0.043±0.00 0.091±0.00 N/A 0.220±0.00 3.076±0.00 N/A 0.162±0.00 0.594±0.00 0.579±0.54 0.181±0.00 0.188±0.00 0.612±0.73 0.059±0.04 0.053±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025013 ENSMUST00000025986 0.096±0.00 N/A 0.067±0.00 0.165±0.00 N/A 0.194±0.03 0.231±0.01 0.034±0.00 N/A N/A 0.006±0.00 0.670±0.28 0.025±0.02 0.180±0.07
ENSMUST00000169941 0.064±0.03 0.075±0.03 0.044±0.00 N/A 0.018±0.00 0.138±0.02 0.059±0.00 0.026±0.00 0.006±0.00 0.030±0.02 0.011±0.00 0.611±0.09 0.048±0.03 0.060±0.02
ENSMUSG00000025016 ENSMUST00000025989 27.497±8.04 40.627±9.52 41.705±1.01 23.935±3.48 34.882±13.91 60.871±23.42 12.850±0.78 34.398±1.70 23.568±7.99 49.757±5.01 12.096±0.61 53.781±14.61 25.250±11.65 13.138±3.83

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