C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003DB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042566-ENSDARG00000042571 CGP 7955 20:30398260-30411478
GeneTranscriptPositionBiotype
ENSDARG00000042566 (rps7)
ribosomal protein S7 		ENSDART00000126229 (rps7-001) 30398260-30403129 protein_coding
ENSDARG00000042571 (rnaseh1)
ribonuclease H1 		ENSDART00000062441 (rnaseh1-001) 30404785-30411478 protein_coding
ENSDART00000148242 (rnaseh1-002) 30404711-30409808 protein_coding
ENSDART00000153019 (rnaseh1-003) 30407006-30411227 processed_transcript
ENSDARG00000080823 (SNORA73)
Small nucleolar RNA SNORA73 family 		ENSDART00000116011 (SNORA73.1-201) 30399773-30399992 snoRNA
ENSDARG00000082242 (SNORA73)
Small nucleolar RNA SNORA73 family 		ENSDART00000117810 (SNORA73.2-201) 30399115-30399335 snoRNA
ENSDARG00000083108 (SNORA73)
Small nucleolar RNA SNORA73 family 		ENSDART00000116250 (SNORA73.3-201) 30400594-30400814 snoRNA
ENSDARG00000083400 (SNORA73)
Small nucleolar RNA SNORA73 family 		ENSDART00000118284 (SNORA73.4-201) 30398571-30398791 snoRNA

Danio rerio Ensembl (Zv9)

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CIL_0003DB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061477-ENSMUSG00000020630 CGP 10090 12:28630847-28659591
GeneTranscriptPositionBiotype
ENSMUSG00000020630 (Rnaseh1)
ribonuclease H1 		ENSMUST00000020959 (Rnaseh1-201) 28649602-28659591 protein_coding
ENSMUSG00000061477 (Rps7)
ribosomal protein S7 		ENSMUST00000074267 (Rps7-201) 28630847-28635953 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DB_0001ENSDARG00000042566ENSDART00000126229ENSDARG00000042571ENSDART00000062441ENSDART00000148242ENSDART00000153019ENSDARG00000080823ENSDART00000116011ENSDARG00000082242ENSDART00000117810ENSDARG00000083108ENSDART00000116250ENSDARG00000083400ENSDART00000118284CIL_0003DB_0002ENSMUSG00000020630ENSMUST00000020959ENSMUSG00000061477ENSMUST00000074267
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DB_0001ENSDARG00000042566ENSDART00000126229ENSDARG00000042571ENSDART00000062441ENSDART00000148242ENSDART00000153019ENSDARG00000080823ENSDART00000116011ENSDARG00000082242ENSDART00000117810ENSDARG00000083108ENSDART00000116250ENSDARG00000083400ENSDART00000118284CIL_0003DB_0002ENSMUSG00000020630ENSMUST00000020959ENSMUSG00000061477ENSMUST00000074267
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042566 ENSDART00000126229 N/A N/A N/A 159.673±112.25 N/A N/A 613.982±614.50 592.884±818.55 500.486±0.00 N/A 759.722±0.00 N/A N/A N/A
ENSDARG00000042571 ENSDART00000062441 N/A N/A N/A 9.608±6.30 N/A N/A 8.377±5.94 8.500±6.92 1.626±0.00 N/A 3.995±0.00 N/A N/A N/A
ENSDART00000148242 N/A N/A N/A 2.592±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000153019 N/A N/A N/A N/A N/A N/A 4.859±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000080823 ENSDART00000116011 N/A N/A N/A 18.020±17.29 N/A N/A 0.959±0.00 29.479±0.00 0.917±0.00 N/A 1.103±0.00 N/A N/A N/A
ENSDARG00000082242 ENSDART00000117810 N/A N/A N/A 5.464±3.30 N/A N/A 10.124±8.79 9.717±0.00 0.620±0.00 N/A 1.100±0.00 N/A N/A N/A
ENSDARG00000083108 ENSDART00000116250 N/A N/A N/A 1.431±0.00 N/A N/A 1.252±0.00 N/A 0.601±0.00 N/A N/A N/A N/A N/A
ENSDARG00000083400 ENSDART00000118284 N/A N/A N/A 2.820±0.00 N/A N/A 4.017±0.00 9.922±0.00 2.031±0.00 N/A 1.067±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020630 ENSMUST00000020959 4.912±1.11 4.277±1.48 9.476±1.95 7.900±0.85 3.822±1.19 5.350±1.20 2.965±0.34 4.462±0.68 5.588±3.46 5.018±0.50 2.848±0.90 6.191±3.23 14.236±5.15 6.033±0.98
ENSMUSG00000061477 ENSMUST00000074267 42.327±10.83 76.134±3.79 320.438±177.64 226.543±147.92 146.171±48.12 232.817±42.47 93.907±8.66 106.392±16.05 257.466±229.42 118.083±21.94 123.952±8.26 264.847±81.46 213.684±130.10 119.056±68.59

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