C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003DS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140740-ENSG00000155714 CGP 9606 16:21952660-22001110
GeneTranscriptPositionBiotype
ENSG00000140740 (UQCRC2)
ubiquinol-cytochrome c reductase core protein II 		ENST00000268379 (UQCRC2-001) 21952660-21983660 protein_coding
ENST00000561553 (UQCRC2-003) 21953371-21983325 protein_coding
ENST00000561798 (UQCRC2-010) 21980262-21983347 retained_intron
ENST00000563711 (UQCRC2-004) 21962192-21976947 retained_intron
ENST00000563898 (UQCRC2-002) 21953387-21983336 nonsense_mediated_decay
ENST00000564095 (UQCRC2-008) 21953403-21962510 nonsense_mediated_decay
ENST00000565331 (UQCRC2-005) 21953387-21965505 protein_coding
ENST00000565464 (UQCRC2-006) 21953298-21962819 nonsense_mediated_decay
ENST00000567597 (UQCRC2-011) 21961462-21965533 retained_intron
ENST00000567757 (UQCRC2-007) 21953371-21963212 retained_intron
ENST00000567810 (UQCRC2-009) 21968462-21973957 retained_intron
ENST00000618892 (UQCRC2-012) 21957488-21959780 protein_coding
ENSG00000155714 (PDZD9)
PDZ domain containing 9 		ENST00000424898 (PDZD9-003) 21983865-22001110 protein_coding
ENST00000523914 (PDZD9-001) 21983865-22001110 nonsense_mediated_decay
ENST00000537222 (PDZD9-002) 21983865-22001098 protein_coding
ENSG00000260395 (CTD-2649C14.1)
 ENST00000562640 (CTD-2649C14.1-001) 21998310-21999656 processed_pseudogene
CIL_0003DS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030884-ENSMUSG00000030887 CGP 10090 7:120635176-120670343
GeneTranscriptPositionBiotype
ENSMUSG00000030884 (Uqcrc2)
ubiquinol cytochrome c reductase core protein 2 		ENSMUST00000033176 (Uqcrc2-001) 120635176-120659478 protein_coding
ENSMUST00000123704 (Uqcrc2-003) 120635515-120645242 processed_transcript
ENSMUST00000131191 (Uqcrc2-005) 120651280-120657859 retained_intron
ENSMUST00000137808 (Uqcrc2-004) 120644918-120650930 retained_intron
ENSMUST00000148958 (Uqcrc2-006) 120637662-120659161 processed_transcript
ENSMUST00000150675 (Uqcrc2-002) 120635240-120643217 processed_transcript
ENSMUSG00000030887 (Pdzd9)
PDZ domain containing 9 		ENSMUST00000033178 (Pdzd9-001) 120659296-120670343 protein_coding
ENSMUST00000127845 (Pdzd9-002) 120659354-120670250 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DS_0001ENSG00000140740ENST00000268379ENST00000561553ENST00000561798ENST00000563711ENST00000563898ENST00000564095ENST00000565331ENST00000565464ENST00000567597ENST00000567757ENST00000567810ENST00000618892ENSG00000155714ENST00000424898ENST00000523914ENST00000537222ENSG00000260395ENST00000562640CIL_0003DS_0002ENSMUSG00000030884ENSMUST00000033176ENSMUST00000123704ENSMUST00000131191ENSMUST00000137808ENSMUST00000148958ENSMUST00000150675ENSMUSG00000030887ENSMUST00000033178ENSMUST00000127845
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DS_0001ENSG00000140740ENST00000268379ENST00000561553ENST00000563898ENST00000565464ENSG00000155714ENST00000424898ENST00000523914ENST00000537222ENSG00000260395ENST00000562640CIL_0003DS_0002ENSMUSG00000030884ENSMUST00000033176ENSMUST00000123704ENSMUST00000148958ENSMUSG00000030887ENSMUST00000033178ENSMUST00000127845
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140740 ENST00000268379 6.545±0.00 6.252±0.00 3.164±0.00 13.793±3.72 6.906±3.51 11.936±3.42 24.318±15.18 11.815±4.49 6.455±0.73 6.652±0.00 19.227±0.17 23.023±5.52 9.867±3.87 6.385±2.24
ENST00000561553 27.481±0.00 22.582±0.00 13.186±0.00 27.296±2.69 24.179±8.75 27.397±3.97 56.503±21.70 29.602±6.69 17.018±3.39 16.721±2.25 32.265±2.82 14.766±4.92 13.941±2.95 15.383±5.67
ENST00000561798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563898 27.118±0.00 24.432±0.00 N/A 42.457±0.00 34.429±0.00 41.988±0.00 126.625±0.00 57.043±0.00 33.978±0.00 36.944±0.00 76.087±0.00 28.317±16.48 30.351±8.14 18.392±6.08
ENST00000564095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565464 N/A N/A 8.606±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155714 ENST00000424898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.689±4.41
ENST00000523914 0.226±0.00 0.254±0.00 N/A 0.178±0.00 0.194±0.00 0.103±0.00 0.008±0.00 0.068±0.00 0.023±0.00 0.114±0.00 N/A N/A 0.034±0.00 1.642±0.00
ENST00000537222 N/A N/A N/A 0.038±0.00 N/A 0.252±0.00 N/A N/A 0.043±0.00 0.332±0.00 0.107±0.00 0.163±0.11 0.060±0.03 2.526±0.00
ENSG00000260395 ENST00000562640 0.026±0.00 0.041±0.00 N/A 0.055±0.00 N/A N/A N/A 0.121±0.00 N/A N/A N/A N/A N/A 0.060±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030884 ENSMUST00000033176 78.112±10.68 27.850±9.20 75.835±11.20 45.388±18.71 58.025±26.64 55.605±6.13 237.727±63.31 139.793±13.14 77.028±29.02 29.949±3.27 168.105±46.02 32.177±20.02 61.272±43.49 26.845±9.53
ENSMUST00000123704 N/A N/A N/A 200.101±0.00 N/A N/A N/A N/A N/A N/A N/A 162.845±0.00 140.925±48.90 53.300±0.00
ENSMUST00000131191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 134.437±0.00 N/A N/A N/A
ENSMUST00000150675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030887 ENSMUST00000033178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 41.661±17.99
ENSMUST00000127845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.276±2.74

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