C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquinol-cytochrome c reductase core protein II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000563898 UQCRC2-002 ENSG00000140740 9606 + 16:21953387-21983336 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000563898
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000563898 27.118±0.00 24.432±0.00 42.457±0.00 34.429±0.00 41.988±0.00 126.625±0.00 57.043±0.00 33.978±0.00 36.944±0.00 76.087±0.00 28.317±16.48 30.351±8.14 18.392±6.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DS CIL_0003DS_0001 CGP 16:21952660-22001110

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004222 IEA metalloendopeptidase activity
GO:0005739 IDA mitochondrion
GO:0006508 IEA proteolysis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033176 Uqcrc2-001 protein_coding Mus_musculus 0 1046
ENSMUST00000123704 Uqcrc2-003 processed_transcript Mus_musculus 0 617
ENSMUST00000150675 Uqcrc2-002 processed_transcript Mus_musculus 0 549

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