C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003EO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008278-ENSDARG00000024109 CGP 7955 7:26146924-26178688
GeneTranscriptPositionBiotype
ENSDARG00000008278 (rcor2)
REST corepressor 2 		ENSDART00000002961 (rcor2-001) 26146924-26161659 protein_coding
ENSDART00000131671 (rcor2-002) 26157050-26161813 processed_transcript
ENSDARG00000024109 (naa40)
N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) 		ENSDART00000039265 (naa40-001) 26167151-26178688 protein_coding
ENSDART00000131935 (naa40-003) 26170404-26171598 protein_coding
ENSDART00000141814 (naa40-002) 26167205-26171473 protein_coding
ENSDART00000144526 (naa40-004) 26170942-26178124 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003EO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167771-ENSG00000110583 CGP 9606 11:63911221-63957328
GeneTranscriptPositionBiotype
ENSG00000110583 (NAA40)
N(alpha)-acetyltransferase 40, NatD catalytic subunit 		ENST00000338447 (NAA40-013) 63938959-63957319 retained_intron
ENST00000377793 (NAA40-001) 63938996-63957328 protein_coding
ENST00000534965 (NAA40-002) 63938996-63954675 nonsense_mediated_decay
ENST00000536939 (NAA40-012) 63938994-63952619 processed_transcript
ENST00000539656 (NAA40-007) 63939002-63954586 protein_coding
ENST00000542163 (NAA40-004) 63939248-63954519 protein_coding
ENST00000542633 (NAA40-011) 63952403-63954474 processed_transcript
ENST00000544138 (NAA40-008) 63939002-63954591 nonsense_mediated_decay
ENST00000544194 (NAA40-006) 63952369-63954717 retained_intron
ENST00000545161 (NAA40-010) 63952148-63952571 retained_intron
ENSG00000167771 (RCOR2)
REST corepressor 2 		ENST00000301459 (RCOR2-001) 63911221-63916844 protein_coding
ENST00000473926 (RCOR2-004) 63911955-63912307 processed_transcript
ENST00000489217 (RCOR2-003) 63911888-63912956 retained_intron

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EO_0001ENSDARG00000008278ENSDART00000002961ENSDART00000131671ENSDARG00000024109ENSDART00000039265ENSDART00000131935ENSDART00000141814ENSDART00000144526CIL_0003EO_0002ENSG00000110583ENST00000338447ENST00000377793ENST00000534965ENST00000536939ENST00000539656ENST00000542163ENST00000542633ENST00000544138ENST00000544194ENST00000545161ENSG00000167771ENST00000301459ENST00000473926ENST00000489217
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EO_0001ENSDARG00000008278ENSDART00000002961ENSDARG00000024109ENSDART00000039265ENSDART00000144526CIL_0003EO_0002ENSG00000110583ENST00000338447ENST00000377793ENST00000534965ENST00000536939ENST00000539656ENST00000542163ENSG00000167771ENST00000301459ENST00000489217
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008278 ENSDART00000002961 N/A N/A N/A 5.451±4.08 N/A N/A 0.139±0.03 1.774±1.63 N/A N/A 0.454±0.00 N/A N/A N/A
ENSDART00000131671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000024109 ENSDART00000039265 N/A N/A N/A 18.620±3.44 N/A N/A 14.979±7.05 13.854±6.43 0.580±0.00 N/A 3.292±0.00 N/A N/A N/A
ENSDART00000131935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144526 N/A N/A N/A 7.994±1.21 N/A N/A 6.172±2.43 N/A 1.264±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110583 ENST00000338447 0.414±0.00 1.973±0.00 N/A 0.406±0.02 0.224±0.00 0.337±0.11 0.393±0.26 1.082±0.00 0.376±0.23 0.350±0.00 0.143±0.00 0.793±0.34 0.597±0.27 N/A
ENST00000377793 1.625±0.00 N/A 0.541±0.00 0.421±0.00 2.729±0.00 0.922±0.00 1.472±0.95 4.809±0.00 N/A 1.363±0.90 0.400±0.00 2.478±1.18 3.864±0.48 5.738±3.62
ENST00000534965 N/A N/A N/A 0.605±0.00 1.550±0.00 N/A N/A N/A N/A N/A N/A 0.680±0.00 N/A N/A
ENST00000536939 N/A N/A 1.134±0.00 N/A 1.587±0.00 N/A N/A N/A N/A N/A 1.034±0.00 N/A N/A N/A
ENST00000539656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A N/A
ENST00000542163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.703±0.00 N/A N/A
ENST00000542633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167771 ENST00000301459 0.070±0.00 0.205±0.00 N/A 1.199±0.27 0.644±0.04 0.285±0.16 0.597±0.07 0.154±0.00 0.103±0.00 0.075±0.01 0.128±0.04 2.054±1.62 0.921±0.42 2.838±0.22
ENST00000473926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489217 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 0.322±0.00 2.019±0.00 N/A N/A

Loading