C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003EO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008278-ENSDARG00000024109 CGP 7955 7:26146924-26178688
GeneTranscriptPositionBiotype
ENSDARG00000008278 (rcor2)
REST corepressor 2 		ENSDART00000002961 (rcor2-001) 26146924-26161659 protein_coding
ENSDART00000131671 (rcor2-002) 26157050-26161813 processed_transcript
ENSDARG00000024109 (naa40)
N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) 		ENSDART00000039265 (naa40-001) 26167151-26178688 protein_coding
ENSDART00000131935 (naa40-003) 26170404-26171598 protein_coding
ENSDART00000141814 (naa40-002) 26167205-26171473 protein_coding
ENSDART00000144526 (naa40-004) 26170942-26178124 protein_coding
CIL_0003EO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167771-ENSG00000110583 CGP 9606 11:63911221-63957328
GeneTranscriptPositionBiotype
ENSG00000110583 (NAA40)
N(alpha)-acetyltransferase 40, NatD catalytic subunit 		ENST00000338447 (NAA40-013) 63938959-63957319 retained_intron
ENST00000377793 (NAA40-001) 63938996-63957328 protein_coding
ENST00000534965 (NAA40-002) 63938996-63954675 nonsense_mediated_decay
ENST00000536939 (NAA40-012) 63938994-63952619 processed_transcript
ENST00000539656 (NAA40-007) 63939002-63954586 protein_coding
ENST00000542163 (NAA40-004) 63939248-63954519 protein_coding
ENST00000542633 (NAA40-011) 63952403-63954474 processed_transcript
ENST00000544138 (NAA40-008) 63939002-63954591 nonsense_mediated_decay
ENST00000544194 (NAA40-006) 63952369-63954717 retained_intron
ENST00000545161 (NAA40-010) 63952148-63952571 retained_intron
ENSG00000167771 (RCOR2)
REST corepressor 2 		ENST00000301459 (RCOR2-001) 63911221-63916844 protein_coding
ENST00000473926 (RCOR2-004) 63911955-63912307 processed_transcript
ENST00000489217 (RCOR2-003) 63911888-63912956 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EO_0001ENSDARG00000008278ENSDART00000002961ENSDART00000131671ENSDARG00000024109ENSDART00000039265ENSDART00000131935ENSDART00000141814ENSDART00000144526CIL_0003EO_0002ENSG00000110583ENST00000338447ENST00000377793ENST00000534965ENST00000536939ENST00000539656ENST00000542163ENST00000542633ENST00000544138ENST00000544194ENST00000545161ENSG00000167771ENST00000301459ENST00000473926ENST00000489217
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EO_0001ENSDARG00000008278ENSDART00000002961ENSDARG00000024109ENSDART00000039265ENSDART00000144526CIL_0003EO_0002ENSG00000110583ENST00000338447ENST00000377793ENST00000534965ENST00000536939ENST00000539656ENST00000542163ENSG00000167771ENST00000301459ENST00000489217
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008278 ENSDART00000002961 N/A N/A N/A 5.451±4.08 N/A N/A 0.139±0.03 1.774±1.63 N/A N/A 0.454±0.00 N/A N/A N/A
ENSDART00000131671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000024109 ENSDART00000039265 N/A N/A N/A 18.620±3.44 N/A N/A 14.979±7.05 13.854±6.43 0.580±0.00 N/A 3.292±0.00 N/A N/A N/A
ENSDART00000131935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144526 N/A N/A N/A 7.994±1.21 N/A N/A 6.172±2.43 N/A 1.264±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110583 ENST00000338447 0.414±0.00 1.973±0.00 N/A 0.406±0.02 0.224±0.00 0.337±0.11 0.393±0.26 1.082±0.00 0.376±0.23 0.350±0.00 0.143±0.00 0.793±0.34 0.597±0.27 N/A
ENST00000377793 1.625±0.00 N/A 0.541±0.00 0.421±0.00 2.729±0.00 0.922±0.00 1.472±0.95 4.809±0.00 N/A 1.363±0.90 0.400±0.00 2.478±1.18 3.864±0.48 5.738±3.62
ENST00000534965 N/A N/A N/A 0.605±0.00 1.550±0.00 N/A N/A N/A N/A N/A N/A 0.680±0.00 N/A N/A
ENST00000536939 N/A N/A 1.134±0.00 N/A 1.587±0.00 N/A N/A N/A N/A N/A 1.034±0.00 N/A N/A N/A
ENST00000539656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.495±0.00 N/A N/A N/A
ENST00000542163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.703±0.00 N/A N/A
ENST00000542633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167771 ENST00000301459 0.070±0.00 0.205±0.00 N/A 1.199±0.27 0.644±0.04 0.285±0.16 0.597±0.07 0.154±0.00 0.103±0.00 0.075±0.01 0.128±0.04 2.054±1.62 0.921±0.42 2.838±0.22
ENST00000473926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489217 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 0.322±0.00 2.019±0.00 N/A N/A

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