C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003FF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087939-ENSDARG00000007195 CGP 7955 11:36893745-37055574
GeneTranscriptPositionBiotype
ENSDARG00000007195 (GRM2 (2 of 2))
glutamate receptor, metabotropic 2
ENSDART00000012940 (GRM2 (2 of 2)-201) 37021294-37055574 protein_coding
ENSDARG00000018146 (gpx1a)
glutathione peroxidase 1a
ENSDART00000025033 (gpx1a-001) 36889368-36891793 protein_coding
ENSDART00000138609 (gpx1a-002) 36889675-36997760 protein_coding
ENSDARG00000041974 (BRK1)
BRICK1, SCAR/WAVE actin-nucleating complex subunit
ENSDART00000061520 (BRK1-002) 36883234-36887247 protein_coding
ENSDART00000124935 (BRK1-001) 36883058-36997724 protein_coding
ENSDARG00000087939 (TEX264)
testis expressed 264
ENSDART00000125221 (TEX264-201) 36893745-36989398 protein_coding
CIL_0003FF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164081-ENSG00000164082 CGP 9606 3:51662693-51718613
GeneTranscriptPositionBiotype
ENSG00000164080 (RAD54L2)
RAD54-like 2 (S. cerevisiae)
ENST00000409535 (RAD54L2-001) 51541580-51668667 protein_coding
ENST00000432863 (RAD54L2-005) 51629391-51663457 protein_coding
ENST00000461680 (RAD54L2-002) 51630322-51663594 retained_intron
ENST00000462377 (RAD54L2-004) 51629393-51630931 retained_intron
ENST00000487093 (RAD54L2-003) 51541580-51663594 retained_intron
ENST00000602430 (RAD54L2-006) 51541144-51541870 retained_intron
ENSG00000164081 (TEX264)
testis expressed 264
ENST00000341333 (TEX264-001) 51671232-51704323 protein_coding
ENST00000395057 (TEX264-003) 51671274-51704321 protein_coding
ENST00000412249 (TEX264-007) 51671238-51684573 protein_coding
ENST00000415259 (TEX264-004) 51671255-51704283 protein_coding
ENST00000416589 (TEX264-002) 51671296-51704317 protein_coding
ENST00000419358 (TEX264-012) 51662693-51684467 protein_coding
ENST00000425781 (TEX264-008) 51671245-51684607 protein_coding
ENST00000444233 (TEX264-011) 51671895-51699575 protein_coding
ENST00000457573 (TEX264-201) 51671175-51704322 protein_coding
ENST00000457927 (TEX264-010) 51671828-51699572 protein_coding
ENST00000463857 (TEX264-005) 51681461-51704317 processed_transcript
ENST00000483429 (TEX264-013) 51674477-51684559 processed_transcript
ENST00000489026 (TEX264-006) 51671175-51704018 processed_transcript
ENST00000493444 (TEX264-009) 51671627-51703809 processed_transcript
ENST00000611400 (TEX264-202) 51671175-51704322 protein_coding
ENST00000614067 (TEX264-203) 51671175-51704322 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003FF_0001ENSDARG00000007195ENSDART00000012940ENSDARG00000018146ENSDART00000025033ENSDART00000138609ENSDARG00000041974ENSDART00000061520ENSDART00000124935ENSDARG00000087939ENSDART00000125221CIL_0003FF_0002ENSG00000164080ENST00000409535ENST00000432863ENST00000461680ENST00000462377ENST00000487093ENST00000602430ENSG00000164081ENST00000341333ENST00000395057ENST00000412249ENST00000415259ENST00000416589ENST00000419358ENST00000425781ENST00000444233ENST00000457573ENST00000457927ENST00000463857ENST00000483429ENST00000489026ENST00000493444ENST00000611400ENST00000614067
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003FF_0001ENSDARG00000007195ENSDART00000012940ENSDARG00000018146ENSDART00000025033ENSDARG00000041974ENSDART00000061520ENSDART00000124935ENSDARG00000087939ENSDART00000125221CIL_0003FF_0002ENSG00000164080ENST00000409535ENST00000432863ENST00000461680ENST00000487093ENSG00000164081ENST00000341333ENST00000416589ENST00000463857ENST00000489026ENST00000493444
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007195 ENSDART00000012940 N/A N/A N/A N/A N/A N/A 0.094±0.07 0.023±0.00 0.046±0.00 N/A 0.929±0.00 N/A N/A N/A
ENSDARG00000018146 ENSDART00000025033 N/A N/A N/A 27.259±3.70 N/A N/A 112.022±33.06 91.565±0.00 28.695±0.00 N/A 27.251±0.00 N/A N/A N/A
ENSDART00000138609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000041974 ENSDART00000061520 N/A N/A N/A 32.995±3.75 N/A N/A N/A N/A N/A N/A 9.698±0.00 N/A N/A N/A
ENSDART00000124935 N/A N/A N/A 76.022±22.43 N/A N/A 16.182±10.10 12.228±5.22 2.944±0.00 N/A 10.352±0.00 N/A N/A N/A
ENSDARG00000087939 ENSDART00000125221 N/A N/A N/A N/A N/A N/A 0.150±0.02 0.255±0.01 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164080 ENST00000409535 4.057±0.00 5.525±0.00 0.718±0.00 2.094±1.54 2.277±1.26 1.640±1.09 1.883±0.00 2.463±0.69 1.685±0.10 2.025±0.58 1.580±0.93 3.354±1.47 2.950±0.93 4.519±0.33
ENST00000432863 N/A N/A 1.251±0.00 0.940±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461680 N/A N/A 0.897±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487093 N/A N/A N/A 0.954±0.00 1.669±0.00 N/A 0.615±0.00 1.856±0.00 2.017±0.00 N/A 1.086±0.00 2.271±0.00 N/A N/A
ENST00000602430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164081 ENST00000341333 15.920±0.00 12.445±0.00 N/A 8.709±4.74 19.496±0.00 15.092±0.00 13.105±0.00 44.851±0.00 20.794±0.00 16.771±0.00 14.375±0.00 25.488±1.46 26.889±7.65 47.025±14.29
ENST00000395057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416589 N/A N/A N/A N/A N/A 6.013±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.880±0.00
ENST00000483429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.209±0.00 16.031±0.00 N/A
ENST00000493444 N/A N/A 10.543±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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