C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003GE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000206172-ENSG00000086506 CGP 9606 16:176680-181181
GeneTranscriptPositionBiotype
ENSG00000086506 (HBQ1)
hemoglobin, theta 1 		ENST00000199708 (HBQ1-001) 180453-181181 protein_coding
CIL_0003GE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000069917-ENSMUSG00000020295 CGP 10090 11:32296489-32300873
GeneTranscriptPositionBiotype
ENSMUSG00000020295 (Hbq1a)
hemoglobin, theta 1A 		ENSMUST00000020535 (Hbq1a-001) 32300069-32300873 protein_coding
ENSMUSG00000069917 (Hba-a2)
hemoglobin alpha, adult chain 2 		ENSMUST00000093207 (Hba-a2-001) 32296489-32297298 protein_coding
ENSMUST00000147010 (Hba-a2-002) 32296628-32297255 retained_intron
CIL_0003GE_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000069919-ENSMUSG00000073063 CGP 10090 11:32283511-32287784
GeneTranscriptPositionBiotype
ENSMUSG00000069919 (Hba-a1)
hemoglobin alpha, adult chain 1 		ENSMUST00000093209 (Hba-a1-001) 32283511-32284465 protein_coding
ENSMUST00000142555 (Hba-a1-002) 32283811-32284438 retained_intron
ENSMUSG00000073063 (Hbq1b)
hemoglobin, theta 1B 		ENSMUST00000101387 (Hbq1b-001) 32286965-32287727 protein_coding
ENSMUST00000151724 (Hbq1b-002) 32287001-32287784 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GE_0001ENSG00000086506ENST00000199708CIL_0003GE_0002ENSMUSG00000020295ENSMUST00000020535ENSMUSG00000069917ENSMUST00000093207ENSMUST00000147010CIL_0003GE_0003ENSMUSG00000069919ENSMUST00000093209ENSMUST00000142555ENSMUSG00000073063ENSMUST00000101387ENSMUST00000151724
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GE_0001ENSG00000086506ENST00000199708CIL_0003GE_0002ENSMUSG00000020295ENSMUST00000020535ENSMUSG00000069917ENSMUST00000093207ENSMUST00000147010CIL_0003GE_0003ENSMUSG00000069919ENSMUST00000093209ENSMUST00000142555ENSMUSG00000073063ENSMUST00000101387ENSMUST00000151724
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000086506 ENST00000199708 0.488±0.00 0.089±0.00 N/A 0.988±0.58 0.534±0.00 0.477±0.00 0.092±0.00 N/A N/A 4.362±0.00 N/A 0.224±0.00 1.996±1.30 1.158±0.67
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020295 ENSMUST00000020535 0.058±0.01 N/A 0.017±0.00 0.420±0.09 0.124±0.06 0.145±0.05 0.061±0.00 0.113±0.06 N/A 0.225±0.12 N/A N/A 0.266±0.20 N/A
ENSMUSG00000069917 ENSMUST00000093207 60.095±7.77 53.221±10.32 37.532±23.83 835.519±594.30 49.221±23.76 40.617±29.01 301.982±18.75 206.454±27.15 42.028±8.67 901.983±450.21 9.645±3.76 20.016±11.38 115.205±81.37 3.903±0.41
ENSMUST00000147010 N/A 25.019±6.20 N/A N/A N/A N/A N/A N/A N/A N/A 4.520±1.69 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000069919 ENSMUST00000093209 3.964±1.04 30.240±12.70 22.811±21.29 574.927±416.36 7.326±0.00 9.377±5.65 21.490±3.87 30.626±9.19 19.394±3.42 117.559±52.85 2.426±0.90 6.642±3.27 N/A 0.973±0.08
ENSMUST00000142555 48.991±14.31 79.710±4.23 11.881±1.94 174.902±122.02 63.108±34.02 43.751±29.00 206.716±4.83 174.447±33.34 42.447±17.18 889.754±515.34 16.706±5.57 21.383±16.50 3750.635±4883.46 2.754±1.37
ENSMUSG00000073063 ENSMUST00000101387 0.121±0.05 0.139±0.04 0.019±0.00 0.518±0.34 N/A 0.173±0.00 0.162±0.04 0.088±0.02 N/A 0.286±0.04 N/A 0.185±0.03 0.911±0.52 N/A
ENSMUST00000151724 0.156±0.04 N/A N/A 0.106±0.00 N/A N/A N/A N/A N/A 0.188±0.00 N/A 0.136±0.05 0.624±0.00 N/A

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