C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003GU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122591-ENSG00000122550 CGP 9606 7:22889371-23177914
GeneTranscriptPositionBiotype
ENSG00000122550 (KLHL7)
kelch-like family member 7 		ENST00000322275 (KLHL7-004) 23105785-23126045 protein_coding
ENST00000339077 (KLHL7-002) 23105784-23177914 protein_coding
ENST00000409689 (KLHL7-008) 23106295-23175388 protein_coding
ENST00000410047 (KLHL7-003) 23106298-23126043 protein_coding
ENST00000414163 (KLHL7-013) 23143929-23156168 protein_coding
ENST00000459661 (KLHL7-009) 23105790-23140784 processed_transcript
ENST00000469576 (KLHL7-011) 23165875-23168102 retained_intron
ENST00000469845 (KLHL7-012) 23172789-23174192 retained_intron
ENST00000477076 (KLHL7-006) 23124980-23126049 retained_intron
ENST00000479288 (KLHL7-010) 23105758-23143901 processed_transcript
ENST00000479700 (KLHL7-007) 23106656-23125887 processed_transcript
ENST00000491352 (KLHL7-005) 23106117-23125202 retained_intron
ENST00000521082 (KLHL7-001) 23105758-23175302 nonsense_mediated_decay
ENSG00000122591 (FAM126A)
family with sequence similarity 126, member A 		ENST00000409763 (FAM126A-008) 22978164-23014074 protein_coding
ENST00000409923 (FAM126A-006) 22944509-23014084 protein_coding
ENST00000421730 (FAM126A-009) 22889371-22941190 processed_transcript
ENST00000432176 (FAM126A-001) 22934211-23014129 protein_coding
ENST00000440481 (FAM126A-002) 22941269-23014130 protein_coding
ENST00000465661 (FAM126A-003) 22983994-23014130 processed_transcript
ENST00000467005 (FAM126A-005) 22983750-23014091 retained_intron
ENST00000477349 (FAM126A-004) 22976769-23014088 processed_transcript
ENST00000498833 (FAM126A-007) 22945983-22961316 processed_transcript
ENSG00000230042 (AK3P3)
adenylate kinase 3 pseudogene 3 		ENST00000431883 (AK3P3-001) 23129178-23129841 processed_pseudogene
ENSG00000230658 (KLHL7-AS1)
KLHL7 antisense RNA 1 (head to head) 		ENST00000419813 (KLHL7-AS1-001) 23101228-23105703 lincRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0003GU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028995-ENSMUSG00000028986 CGP 10090 5:23915276-24161223
GeneTranscriptPositionBiotype
ENSMUSG00000028986 (Klhl7)
kelch-like 7 		ENSMUST00000030841 (Klhl7-201) 24100590-24161223 protein_coding
ENSMUST00000163409 (Klhl7-202) 24100590-24161223 protein_coding
ENSMUSG00000028995 (Fam126a)
family with sequence similarity 126, member A 		ENSMUST00000030849 (Fam126a-001) 23960931-24030690 protein_coding
ENSMUST00000101513 (Fam126a-002) 23915277-24030312 protein_coding
ENSMUST00000115109 (Fam126a-004) 23964481-24000019 protein_coding
ENSMUST00000126828 (Fam126a-005) 23915276-23922904 processed_transcript
ENSMUST00000147179 (Fam126a-003) 23988850-24030305 processed_transcript

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GU_0001ENSG00000122550ENST00000322275ENST00000339077ENST00000409689ENST00000410047ENST00000414163ENST00000459661ENST00000469576ENST00000469845ENST00000477076ENST00000479288ENST00000479700ENST00000491352ENST00000521082ENSG00000122591ENST00000409763ENST00000409923ENST00000421730ENST00000432176ENST00000440481ENST00000465661ENST00000467005ENST00000477349ENST00000498833ENSG00000230042ENST00000431883ENSG00000230658ENST00000419813CIL_0003GU_0002ENSMUSG00000028986ENSMUST00000030841ENSMUST00000163409ENSMUSG00000028995ENSMUST00000030849ENSMUST00000101513ENSMUST00000115109ENSMUST00000126828ENSMUST00000147179
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GU_0001ENSG00000122550ENST00000322275ENST00000339077ENST00000409689ENST00000469576ENST00000469845ENST00000521082ENSG00000122591ENST00000409763ENST00000409923ENST00000432176ENST00000440481ENST00000498833ENSG00000230042ENST00000431883ENSG00000230658ENST00000419813CIL_0003GU_0002ENSMUSG00000028986ENSMUST00000030841ENSMUST00000163409ENSMUSG00000028995ENSMUST00000030849ENSMUST00000101513ENSMUST00000115109
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122550 ENST00000322275 N/A N/A 0.704±0.00 N/A N/A N/A N/A N/A N/A 3.009±0.19 N/A 2.675±1.83 2.025±0.03 14.971±1.93
ENST00000339077 N/A 0.445±0.00 N/A 0.338±0.00 N/A N/A N/A N/A 0.137±0.00 N/A 0.210±0.00 N/A N/A N/A
ENST00000409689 1.294±0.00 1.176±0.00 0.673±0.00 2.710±1.63 1.693±1.07 1.142±0.71 4.495±2.77 N/A 1.137±0.13 1.383±0.00 0.531±0.10 3.084±2.01 1.715±0.05 4.680±1.27
ENST00000410047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469576 N/A N/A 3.850±0.00 N/A N/A N/A N/A N/A N/A N/A 3.540±0.00 N/A N/A N/A
ENST00000469845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.590±0.00 19.229±0.00 42.565±0.00
ENST00000477076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521082 3.236±0.00 1.747±0.00 N/A 4.922±2.44 1.745±0.66 3.058±1.43 6.645±3.70 1.019±0.00 0.605±0.37 3.015±0.00 0.935±0.00 2.234±1.04 1.896±0.99 6.383±0.00
ENSG00000122591 ENST00000409763 N/A N/A 3.210±0.00 N/A N/A 4.593±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409923 1.976±0.00 N/A N/A 0.571±0.00 2.815±0.00 0.727±0.00 1.262±0.14 0.551±0.00 3.723±0.00 3.398±0.00 N/A 0.814±0.25 1.829±1.19 4.394±0.00
ENST00000421730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432176 N/A 0.391±0.00 N/A 0.226±0.00 0.366±0.00 0.407±0.00 N/A 0.238±0.05 0.506±0.00 0.618±0.00 N/A 0.202±0.09 N/A N/A
ENST00000440481 4.071±0.00 2.518±0.00 0.809±0.00 2.509±0.00 2.520±0.81 2.837±2.08 1.442±0.61 1.268±0.13 1.752±0.77 3.482±0.00 3.160±1.53 1.632±0.65 2.270±0.78 4.836±0.00
ENST00000465661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.512±0.00 7.869±0.00 9.362±0.00
ENSG00000230042 ENST00000431883 0.082±0.00 0.043±0.00 0.431±0.00 0.661±0.44 0.847±0.37 0.198±0.10 1.757±0.15 N/A N/A 0.299±0.18 N/A 0.490±0.20 0.103±0.02 0.976±0.59
ENSG00000230658 ENST00000419813 0.114±0.00 0.384±0.00 0.027±0.00 0.291±0.25 0.114±0.05 0.143±0.00 0.081±0.06 0.198±0.00 0.065±0.03 0.003±0.00 0.114±0.00 0.147±0.09 0.056±0.03 0.642±0.21
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028986 ENSMUST00000030841 5.399±1.06 2.128±0.47 8.361±4.22 29.523±12.92 3.051±0.52 1.824±0.55 4.784±0.95 4.916±0.47 4.553±3.48 4.748±0.66 6.247±2.96 4.654±3.14 2.259±0.80 11.123±3.14
ENSMUST00000163409 N/A 2.428±0.00 N/A N/A N/A 0.796±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028995 ENSMUST00000030849 3.139±0.43 12.991±2.58 1.246±0.07 6.778±4.24 2.282±0.69 1.916±0.78 1.163±0.67 1.873±0.46 6.360±5.71 3.546±0.79 0.383±0.14 9.333±3.66 4.892±3.55 9.500±0.42
ENSMUST00000101513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.524±2.97
ENSMUST00000115109 N/A N/A N/A 2.395±0.00 N/A N/A N/A N/A N/A N/A N/A 53.133±0.00 8.353±8.48 28.916±0.00
ENSMUST00000126828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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