C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kelch-like 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030841 Klhl7-201 ENSMUSG00000028986 10090 + 5:24100590-24161223 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030841
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030841 5.399±1.06 2.128±0.47 8.361±4.22 29.523±12.92 3.051±0.52 1.824±0.55 4.784±0.95 4.916±0.47 4.553±3.48 4.748±0.66 6.247±2.96 4.654±3.14 2.259±0.80 11.123±3.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GU CIL_0003GU_0002 CGP 5:23915276-24161223
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_00022N CIL_00022N_0002 CGP 5:24100590-24184013

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0016567 ISS protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0042803 ISS protein homodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322275 KLHL7-004 protein_coding Homo_sapiens 0 621
ENST00000339077 KLHL7-002 protein_coding Homo_sapiens 0 2614
ENST00000409689 KLHL7-008 protein_coding Homo_sapiens 0 2449
ENST00000410047 KLHL7-003 protein_coding Homo_sapiens 0 490
ENST00000414163 KLHL7-013 protein_coding Homo_sapiens 0 350
ENST00000459661 KLHL7-009 processed_transcript Homo_sapiens 0 392
ENST00000469576 KLHL7-011 retained_intron Homo_sapiens 0 392
ENST00000469845 KLHL7-012 retained_intron Homo_sapiens 0 333
ENST00000477076 KLHL7-006 retained_intron Homo_sapiens 0 206
ENST00000479700 KLHL7-007 processed_transcript Homo_sapiens 0 490
ENST00000491352 KLHL7-005 retained_intron Homo_sapiens 0 494
ENST00000521082 KLHL7-001 nonsense_mediated_decay Homo_sapiens 0 2435

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