C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003ID_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180537-ENSG00000112149 CGP 9606 6:13924446-14136918
GeneTranscriptPositionBiotype
ENSG00000112149 (CD83)
CD83 molecule
ENST00000379153 (CD83-001) 14117641-14136918 protein_coding
ENST00000612003 (CD83-201) 14117256-14136918 protein_coding
ENSG00000180537 (RNF182)
ring finger protein 182
ENST00000420478 (RNF182-002) 13924896-13977606 protein_coding
ENST00000423553 (RNF182-003) 13925193-13977367 protein_coding
ENST00000471906 (RNF182-005) 13924955-13977158 protein_coding
ENST00000488300 (RNF182-001) 13924867-13980302 protein_coding
ENST00000488763 (RNF182-004) 13924446-13977272 protein_coding
ENST00000537388 (RNF182-201) 13925193-13980008 protein_coding
ENST00000537663 (RNF182-202) 13924446-13980008 protein_coding
ENST00000544682 (RNF182-203) 13924867-13980008 protein_coding
ENSG00000220868 (MRPL35P1)
mitochondrial ribosomal protein L35 pseudogene 1
ENST00000404272 (MRPL35P1-001) 13949095-13949666 processed_pseudogene
ENSG00000233981 (RP3-380E11.2)
ENST00000427011 (RP3-380E11.2-001) 14004920-14006901 lincRNA
CIL_0003ID_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044164-ENSMUSG00000015396 CGP 10090 13:43615710-43803130
GeneTranscriptPositionBiotype
ENSMUSG00000015396 (Cd83)
CD83 antigen
ENSMUST00000015540 (Cd83-201) 43785107-43803130 protein_coding
ENSMUSG00000044164 (Rnf182)
ring finger protein 182
ENSMUST00000059986 (Rnf182-001) 43615710-43670945 protein_coding
ENSMUST00000161817 (Rnf182-002) 43615983-43668066 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ID_0001ENSG00000112149ENST00000379153ENST00000612003ENSG00000180537ENST00000420478ENST00000423553ENST00000471906ENST00000488300ENST00000488763ENST00000537388ENST00000537663ENST00000544682ENSG00000220868ENST00000404272ENSG00000233981ENST00000427011CIL_0003ID_0002ENSMUSG00000015396ENSMUST00000015540ENSMUSG00000044164ENSMUST00000059986ENSMUST00000161817
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ID_0001ENSG00000112149ENST00000379153ENST00000612003ENSG00000180537ENST00000420478ENST00000488300ENST00000537388ENST00000537663ENST00000544682ENSG00000220868ENST00000404272ENSG00000233981ENST00000427011CIL_0003ID_0002ENSMUSG00000015396ENSMUST00000015540ENSMUSG00000044164ENSMUST00000059986ENSMUST00000161817
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112149 ENST00000379153 N/A 8.149±0.00 N/A 6.270±1.98 4.322±2.11 N/A 0.135±0.00 10.921±0.00 0.303±0.00 8.034±4.88 0.364±0.00 4.578±3.05 1.765±0.50 2.987±1.85
ENST00000612003 0.576±0.00 N/A 2.718±0.00 N/A N/A 0.743±0.00 0.219±0.08 0.941±0.00 0.868±0.00 N/A 0.465±0.00 2.779±0.38 1.809±1.61 N/A
ENSG00000180537 ENST00000420478 N/A N/A 0.077±0.00 N/A N/A 0.330±0.00 N/A N/A N/A 0.418±0.00 N/A N/A N/A N/A
ENST00000423553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488300 N/A N/A N/A 0.311±0.00 0.070±0.00 N/A 0.024±0.00 N/A 0.009±0.00 N/A N/A 0.065±0.00 N/A N/A
ENST00000488763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537388 0.237±0.00 0.020±0.00 N/A 0.690±0.00 0.462±0.00 0.038±0.02 0.021±0.00 0.139±0.12 N/A N/A 0.031±0.00 0.155±0.11 0.197±0.07 2.156±0.73
ENST00000537663 N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.823±0.00
ENST00000544682 N/A N/A N/A 1.753±1.33 N/A N/A N/A N/A N/A 1.155±0.00 N/A N/A N/A 0.549±0.16
ENSG00000220868 ENST00000404272 N/A N/A N/A 0.138±0.12 N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A
ENSG00000233981 ENST00000427011 N/A 0.107±0.00 N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.227±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015396 ENSMUST00000015540 7.285±3.02 2.393±0.91 2.210±0.64 2.411±0.54 13.611±4.83 4.249±1.22 1.671±0.16 1.563±0.44 0.454±0.15 5.241±0.72 0.609±0.82 5.451±1.36 7.172±6.37 0.057±0.03
ENSMUSG00000044164 ENSMUST00000059986 0.353±0.14 0.083±0.03 0.252±0.00 6.628±3.95 0.194±0.04 0.044±0.02 0.055±0.03 0.227±0.05 0.018±0.01 0.033±0.01 0.015±0.00 0.691±0.29 0.041±0.02 N/A
ENSMUST00000161817 N/A N/A N/A N/A 0.491±0.00 N/A N/A N/A N/A N/A N/A N/A 0.208±0.00 N/A

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