C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 182
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059986 Rnf182-001 ENSMUSG00000044164 10090 + 13:43615710-43670945 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000059986
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000059986 0.353±0.14 0.083±0.03 0.252±0.00 6.628±3.95 0.194±0.04 0.044±0.02 0.055±0.03 0.227±0.05 0.018±0.01 0.033±0.01 0.015±0.00 0.691±0.29 0.041±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IE CIL_0003IE_0002 CGP 13:43538412-43670945
CIL_0003ID CIL_0003ID_0002 CGP 13:43615710-43803130

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000420478 RNF182-002 protein_coding Homo_sapiens 0 603
ENST00000423553 RNF182-003 protein_coding Homo_sapiens 0 311
ENST00000488300 RNF182-001 protein_coding Homo_sapiens 0 942
ENST00000537388 RNF182-201 protein_coding Homo_sapiens 0 942
ENST00000537663 RNF182-202 protein_coding Homo_sapiens 0 942
ENST00000544682 RNF182-203 protein_coding Homo_sapiens 0 942

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