C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003KO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035630-ENSDARG00000027552 CGP 7955 5:14239452-14369466
GeneTranscriptPositionBiotype
ENSDARG00000027552 (mapk1)
mitogen-activated protein kinase 1 		ENSDART00000030213 (mapk1-001) 14307197-14369466 protein_coding
ENSDART00000149440 (mapk1-003) 14333745-14369466 retained_intron
ENSDART00000149700 (mapk1-002) 14313229-14369443 protein_coding
ENSDART00000150095 (mapk1-004) 14313281-14322939 nonsense_mediated_decay
ENSDARG00000035630 (ypel1)
yippee-like 1 (Drosophila) 		ENSDART00000051664 (ypel1-001) 14239452-14288962 protein_coding
CIL_0003KO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100027-ENSG00000100030 CGP 9606 22:21697544-21867680
GeneTranscriptPositionBiotype
ENSG00000100027 (YPEL1)
yippee-like 1 (Drosophila) 		ENST00000339468 (YPEL1-001) 21697544-21735834 protein_coding
ENST00000403503 (YPEL1-003) 21704082-21735755 protein_coding
ENST00000477675 (YPEL1-002) 21700865-21735761 retained_intron
ENSG00000100030 (MAPK1)
mitogen-activated protein kinase 1 		ENST00000215832 (MAPK1-001) 21754500-21867629 protein_coding
ENST00000398822 (MAPK1-002) 21769040-21867680 protein_coding
ENST00000491588 (MAPK1-003) 21763984-21769428 processed_transcript
ENST00000544786 (MAPK1-201) 21769204-21867440 protein_coding
ENSG00000200985 (RNA5SP493)
RNA, 5S ribosomal pseudogene 493 		ENST00000364115 (RNA5SP493-201) 21792434-21792524 rRNA
ENSG00000244671 (RN7SL280P)
RNA, 7SL, cytoplasmic 280, pseudogene 		ENST00000496490 (RN7SL280P-201) 21722895-21723182 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KO_0001ENSDARG00000027552ENSDART00000030213ENSDART00000149440ENSDART00000149700ENSDART00000150095ENSDARG00000035630ENSDART00000051664CIL_0003KO_0002ENSG00000100027ENST00000339468ENST00000403503ENST00000477675ENSG00000100030ENST00000215832ENST00000398822ENST00000491588ENST00000544786ENSG00000200985ENST00000364115ENSG00000244671ENST00000496490
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KO_0001ENSDARG00000027552ENSDART00000030213ENSDART00000149440ENSDARG00000035630ENSDART00000051664CIL_0003KO_0002ENSG00000100027ENST00000339468ENST00000477675ENSG00000100030ENST00000215832ENST00000398822ENST00000544786ENSG00000200985ENST00000364115ENSG00000244671ENST00000496490
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027552 ENSDART00000030213 N/A N/A N/A 24.275±3.05 N/A N/A 3.531±0.84 3.365±0.00 0.950±0.00 N/A 9.774±0.00 N/A N/A N/A
ENSDART00000149440 N/A N/A N/A N/A N/A N/A N/A 1.333±0.35 N/A N/A N/A N/A N/A N/A
ENSDART00000149700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000035630 ENSDART00000051664 N/A N/A N/A 0.317±0.00 N/A N/A N/A 0.556±0.00 0.145±0.00 N/A 2.357±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100027 ENST00000339468 1.749±0.00 1.889±0.00 N/A 3.456±1.80 1.418±0.76 1.602±1.20 1.164±0.77 1.751±0.08 1.041±0.00 1.846±1.08 3.716±3.49 1.827±0.98 1.184±0.01 6.499±2.31
ENST00000403503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 49.929±20.20
ENSG00000100030 ENST00000215832 N/A N/A 2.275±0.00 17.453±7.56 3.273±0.00 5.743±2.30 1.429±0.00 2.288±0.00 1.908±0.00 2.523±0.00 3.374±2.10 4.639±3.64 7.267±0.00 7.081±0.00
ENST00000398822 11.322±0.00 N/A 2.983±0.00 14.817±0.00 N/A 4.123±0.00 8.022±4.84 7.973±0.00 8.762±0.00 13.020±0.00 3.056±0.00 11.325±1.33 11.886±1.33 22.460±0.04
ENST00000491588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544786 N/A N/A 5.348±0.00 28.663±0.00 8.118±0.00 11.444±0.00 N/A N/A 8.246±0.00 12.007±0.00 9.355±3.00 23.067±0.00 N/A 23.240±0.00
ENSG00000200985 ENST00000364115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.351±0.00 N/A N/A
ENSG00000244671 ENST00000496490 N/A 0.125±0.00 N/A 0.205±0.00 0.065±0.00 N/A 0.214±0.00 0.064±0.00 N/A N/A N/A N/A N/A 0.623±0.45

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