C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003RH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004754-ENSDARG00000091092 CGP 7955 21:41543121-41583017
GeneTranscriptPositionBiotype
ENSDARG00000004754 (hspa4a)
heat shock protein 4a 		ENSDART00000021037 (hspa4a-201) 41543121-41577027 protein_coding
ENSDART00000148630 (hspa4a-001) 41556802-41577027 protein_coding
ENSDARG00000091092 (zcchc10)
zinc finger, CCHC domain containing 10 		ENSDART00000115192 (zcchc10-201) 41578284-41583014 protein_coding
ENSDART00000121725 (zcchc10-001) 41578284-41583017 protein_coding
ENSDART00000151249 (zcchc10-003) 41579496-41582071 retained_intron
ENSDART00000151362 (zcchc10-002) 41576791-41579544 protein_coding
CIL_0003RH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020361-ENSMUSG00000018239 CGP 10090 11:53259814-53333301
GeneTranscriptPositionBiotype
ENSMUSG00000018239 (Zcchc10)
zinc finger, CCHC domain containing 10 		ENSMUST00000018383 (Zcchc10-001) 53324679-53333301 protein_coding
ENSMUST00000141585 (Zcchc10-002) 53327400-53332479 nonsense_mediated_decay
ENSMUSG00000020361 (Hspa4)
heat shock protein 4 		ENSMUST00000020630 (Hspa4-001) 53259814-53300457 protein_coding
ENSMUST00000139322 (Hspa4-003) 53262880-53267241 retained_intron
ENSMUST00000151854 (Hspa4-002) 53264247-53300411 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RH_0001ENSDARG00000004754ENSDART00000021037ENSDART00000148630ENSDARG00000091092ENSDART00000115192ENSDART00000121725ENSDART00000151249ENSDART00000151362CIL_0003RH_0002ENSMUSG00000018239ENSMUST00000018383ENSMUST00000141585ENSMUSG00000020361ENSMUST00000020630ENSMUST00000139322ENSMUST00000151854
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RH_0001ENSDARG00000004754ENSDART00000021037ENSDARG00000091092ENSDART00000115192ENSDART00000121725CIL_0003RH_0002ENSMUSG00000018239ENSMUST00000018383ENSMUSG00000020361ENSMUST00000020630ENSMUST00000139322ENSMUST00000151854
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004754 ENSDART00000021037 N/A N/A N/A 18.316±1.28 N/A N/A 26.500±5.16 21.364±0.00 18.562±0.00 N/A 11.295±0.00 N/A N/A N/A
ENSDART00000148630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000091092 ENSDART00000115192 N/A N/A N/A 0.857±0.28 N/A N/A 4.009±0.66 5.141±2.10 N/A N/A N/A N/A N/A N/A
ENSDART00000121725 N/A N/A N/A N/A N/A N/A 0.828±0.00 1.283±0.73 N/A N/A N/A N/A N/A N/A
ENSDART00000151249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018239 ENSMUST00000018383 2.852±0.77 8.464±1.94 4.416±0.02 3.570±1.19 3.732±0.77 2.391±0.96 1.557±0.63 2.495±0.79 4.425±3.30 2.872±0.57 2.748±0.47 6.333±2.38 7.748±3.78 1.750±0.58
ENSMUST00000141585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020361 ENSMUST00000020630 18.810±6.30 69.772±8.20 22.895±0.54 40.025±18.00 20.219±9.90 25.592±3.99 14.057±1.21 17.238±2.14 17.653±5.62 23.024±4.99 17.034±0.69 48.657±20.49 50.712±24.60 11.869±0.61
ENSMUST00000139322 N/A N/A N/A 237.356±0.00 N/A N/A N/A N/A N/A N/A N/A 444.024±0.00 459.963±229.10 644.088±0.00
ENSMUST00000151854 N/A 26.772±7.11 N/A N/A 9.392±4.43 5.807±1.95 N/A N/A 4.288±1.16 N/A N/A 13.171±3.82 24.984±9.97 18.703±16.31

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