C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018383 Zcchc10-001 ENSMUSG00000018239 10090 + 11:53324679-53333301 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018383
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018383 2.852±0.77 8.464±1.94 4.416±0.02 3.570±1.19 3.732±0.77 2.391±0.96 1.557±0.63 2.495±0.79 4.425±3.30 2.872±0.57 2.748±0.47 6.333±2.38 7.748±3.78 1.750±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RH CIL_0003RH_0002 CGP 11:53259814-53333301
CIL_0002BQ CIL_0002BQ_0002 CGP 11:53324679-53421830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324170 ZCCHC10-001 protein_coding Homo_sapiens 0 420
ENST00000355372 ZCCHC10-003 protein_coding Homo_sapiens 0 270
ENST00000506403 ZCCHC10-010 processed_transcript Homo_sapiens 0 366
ENST00000508080 ZCCHC10-009 processed_transcript Homo_sapiens 0 231
ENST00000509008 ZCCHC10-006 protein_coding Homo_sapiens 0 263
ENST00000509437 ZCCHC10-004 protein_coding Homo_sapiens 0 364
ENST00000511440 ZCCHC10-008 processed_transcript Homo_sapiens 0 207
ENST00000512933 CTD-2057J6.2-001 processed_pseudogene Homo_sapiens 0 189
ENST00000513541 ZCCHC10-007 protein_coding Homo_sapiens 0 207
ENST00000513848 ZCCHC10-002 protein_coding Homo_sapiens 0 263

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