C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003UA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086225-ENSDARG00000086561 CGP 7955 11:45704914-45908399
GeneTranscriptPositionBiotype
ENSDARG00000030548 (afmid)
arylformamidase 		ENSDART00000043267 (afmid-001) 45728046-45737194 protein_coding
ENSDART00000125387 (afmid-201) 45724182-45737193 protein_coding
ENSDART00000131998 (afmid-002) 45723972-45735661 protein_coding
ENSDART00000133940 (afmid-003) 45723878-45735379 protein_coding
ENSDART00000134767 (afmid-004) 45727972-45729698 retained_intron
ENSDART00000143939 (afmid-005) 45728099-45733387 retained_intron
ENSDARG00000030752 (syngr2b)
synaptogyrin 2b 		ENSDART00000045311 (syngr2b-201) 45891512-45900335 protein_coding
ENSDARG00000060545 (TMC8)
transmembrane channel-like 8 		ENSDART00000085448 (TMC8-201) 45852272-45864148 protein_coding
ENSDARG00000085091 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120491 (5S_rRNA.996-201) 45718374-45718488 rRNA
ENSDARG00000086225 (syngr2b)
synaptogyrin 2b 		ENSDART00000076415 (syngr2b-202) 45704914-45903305 protein_coding
ENSDART00000136494 (syngr2b-002) 45705745-45717531 protein_coding
ENSDART00000138975 (syngr2b-003) 45705676-45714602 protein_coding
ENSDART00000139230 (syngr2b-001) 45705705-45714738 protein_coding
ENSDARG00000086561 (tk1)
thymidine kinase 1, soluble 		ENSDART00000023794 (tk1-201) 45718831-45908399 protein_coding
ENSDART00000111554 (tk1-202) 45720763-45723671 protein_coding
ENSDART00000139922 (tk1-001) 45718829-45723780 protein_coding
ENSDARG00000087157 (cant1b)
calcium activated nucleotidase 1b 		ENSDART00000128942 (cant1b-202) 45745609-45749825 protein_coding
ENSDART00000133229 (cant1b-001) 45738027-45750476 protein_coding
ENSDART00000137334 (cant1b-002) 45741241-45749504 protein_coding
ENSDARG00000096077 (si:dkey-93h22.6)
si:dkey-93h22.6 		ENSDART00000150690 (si:dkey-93h22.6-001) 45750938-45766019 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003UA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108639-ENSG00000167900 CGP 9606 17:78168558-78187233
GeneTranscriptPositionBiotype
ENSG00000167900 (TK1)
thymidine kinase 1, soluble 		ENST00000301634 (TK1-001) 78174075-78187233 protein_coding
ENST00000586613 (TK1-004) 78174926-78187063 protein_coding
ENST00000588734 (TK1-002) 78174121-78187233 protein_coding
ENST00000590430 (TK1-005) 78174830-78187038 protein_coding
ENST00000590862 (TK1-006) 78174702-78187036 protein_coding
ENST00000592126 (TK1-003) 78175069-78187021 retained_intron

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003UA_0001ENSDARG00000030548ENSDART00000043267ENSDART00000125387ENSDART00000131998ENSDART00000133940ENSDART00000134767ENSDART00000143939ENSDARG00000030752ENSDART00000045311ENSDARG00000060545ENSDART00000085448ENSDARG00000085091ENSDART00000120491ENSDARG00000086225ENSDART00000076415ENSDART00000136494ENSDART00000138975ENSDART00000139230ENSDARG00000086561ENSDART00000023794ENSDART00000111554ENSDART00000139922ENSDARG00000087157ENSDART00000128942ENSDART00000133229ENSDART00000137334ENSDARG00000096077ENSDART00000150690CIL_0003UA_0002ENSG00000167900ENST00000301634ENST00000586613ENST00000588734ENST00000590430ENST00000590862ENST00000592126
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003UA_0001ENSDARG00000030548ENSDART00000043267ENSDART00000125387ENSDARG00000030752ENSDART00000045311ENSDARG00000060545ENSDART00000085448ENSDARG00000085091ENSDART00000120491ENSDARG00000086225ENSDART00000076415ENSDART00000136494ENSDART00000138975ENSDART00000139230ENSDARG00000086561ENSDART00000023794ENSDART00000139922ENSDARG00000087157ENSDART00000128942ENSDART00000133229ENSDART00000137334ENSDARG00000096077ENSDART00000150690CIL_0003UA_0002ENSG00000167900ENST00000301634ENST00000586613ENST00000588734ENST00000590862ENST00000592126
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030548 ENSDART00000043267 N/A N/A N/A 4.123±0.67 N/A N/A 3.772±1.58 1.982±1.65 0.341±0.00 N/A 12.074±0.00 N/A N/A N/A
ENSDART00000125387 N/A N/A N/A 8.238±4.33 N/A N/A 0.823±0.30 1.713±1.38 1.021±0.00 N/A N/A N/A N/A N/A
ENSDART00000131998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000030752 ENSDART00000045311 N/A N/A N/A 2.684±2.01 N/A N/A 2.516±1.95 0.397±0.00 0.286±0.00 N/A 28.977±0.00 N/A N/A N/A
ENSDARG00000060545 ENSDART00000085448 N/A N/A N/A 0.346±0.14 N/A N/A 1.925±1.33 N/A 0.102±0.00 N/A 0.961±0.00 N/A N/A N/A
ENSDARG00000085091 ENSDART00000120491 N/A N/A N/A 96.308±80.04 N/A N/A 1.177±0.00 856.391±0.00 N/A N/A 4.321±0.00 N/A N/A N/A
ENSDARG00000086225 ENSDART00000076415 N/A N/A N/A 0.374±0.24 N/A N/A 1.958±1.69 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136494 N/A N/A N/A 0.322±0.17 N/A N/A 2.424±1.06 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138975 N/A N/A N/A N/A N/A N/A 1.530±0.41 N/A 0.075±0.00 N/A N/A N/A N/A N/A
ENSDART00000139230 N/A N/A N/A 1.642±1.70 N/A N/A 3.214±2.74 N/A 0.336±0.00 N/A 34.518±0.00 N/A N/A N/A
ENSDARG00000086561 ENSDART00000023794 N/A N/A N/A 0.470±0.17 N/A N/A 0.377±0.33 9.057±6.66 0.123±0.00 N/A N/A N/A N/A N/A
ENSDART00000111554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139922 N/A N/A N/A 0.129±0.01 N/A N/A 0.087±0.00 N/A 0.039±0.00 N/A N/A N/A N/A N/A
ENSDARG00000087157 ENSDART00000128942 N/A N/A N/A 0.479±0.00 N/A N/A 0.055±0.00 N/A 0.054±0.00 N/A 0.222±0.00 N/A N/A N/A
ENSDART00000133229 N/A N/A N/A 0.093±0.05 N/A N/A 0.181±0.12 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137334 N/A N/A N/A 0.219±0.16 N/A N/A 0.128±0.00 1.443±0.12 N/A N/A N/A N/A N/A N/A
ENSDARG00000096077 ENSDART00000150690 N/A N/A N/A 1.020±0.88 N/A N/A 1.958±0.27 3.426±1.83 0.219±0.00 N/A 0.476±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167900 ENST00000301634 1.389±0.00 2.028±0.00 N/A 0.486±0.00 1.974±0.00 3.570±0.00 0.533±0.42 10.320±0.00 N/A 5.670±0.00 N/A 9.257±8.87 14.840±4.43 2.061±0.20
ENST00000586613 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.552±0.00 N/A 1.122±0.00 N/A N/A
ENST00000588734 N/A 1.034±0.00 N/A N/A N/A N/A N/A N/A 0.112±0.00 1.235±0.00 0.198±0.00 0.519±0.00 N/A 0.358±0.00
ENST00000590430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590862 0.735±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592126 N/A N/A N/A N/A 0.438±0.00 N/A N/A N/A N/A N/A 0.511±0.00 14.531±0.00 8.807±0.00 N/A

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