C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000405_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088764-ENSDARG00000027087 CGP 7955 16:3241436-3411485
GeneTranscriptPositionBiotype
ENSDARG00000027087 (tgfb2)
transforming growth factor, beta 2 		ENSDART00000148927 (tgfb2-001) 3348964-3411485 protein_coding
ENSDARG00000088764 (lyplal1)
lysophospholipase-like 1 		ENSDART00000103722 (lyplal1-201) 3241449-3254301 protein_coding
ENSDART00000128169 (lyplal1-202) 3241447-3254313 protein_coding
ENSDART00000154220 (lyplal1-002) 3251471-3254333 retained_intron
ENSDART00000155432 (lyplal1-001) 3241436-3254312 protein_coding
ENSDART00000157109 (lyplal1-003) 3242317-3245452 processed_transcript
ENSDARG00000090762 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000122567 (5S_rRNA.1880-201) 3333331-3333447 rRNA

Danio rerio Ensembl (Zv9)

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CIL_000405_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039246-ENSMUSG00000039239 CGP 10090 1:186087731-186705992
GeneTranscriptPositionBiotype
ENSMUSG00000039239 (Tgfb2)
transforming growth factor, beta 2 		ENSMUST00000045288 (Tgfb2-201) 186623186-186705992 protein_coding
ENSMUSG00000039246 (Lyplal1)
lysophospholipase-like 1 		ENSMUST00000045388 (Lyplal1-001) 186087731-186117310 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000405_0001ENSDARG00000027087ENSDART00000148927ENSDARG00000088764ENSDART00000103722ENSDART00000128169ENSDART00000154220ENSDART00000155432ENSDART00000157109ENSDARG00000090762ENSDART00000122567CIL_000405_0002ENSMUSG00000039239ENSMUST00000045288ENSMUSG00000039246ENSMUST00000045388
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000405_0001ENSDARG00000027087ENSDART00000148927ENSDARG00000088764ENSDART00000103722ENSDART00000128169ENSDART00000155432ENSDART00000157109ENSDARG00000090762ENSDART00000122567CIL_000405_0002ENSMUSG00000039239ENSMUST00000045288ENSMUSG00000039246ENSMUST00000045388
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027087 ENSDART00000148927 N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A N/A N/A N/A
ENSDARG00000088764 ENSDART00000103722 N/A N/A N/A 2.052±0.83 N/A N/A 2.525±1.66 1.392±0.00 0.638±0.00 N/A 0.513±0.00 N/A N/A N/A
ENSDART00000128169 N/A N/A N/A 1.058±0.75 N/A N/A 2.517±0.00 1.010±0.00 N/A N/A 0.374±0.00 N/A N/A N/A
ENSDART00000154220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000155432 N/A N/A N/A 0.500±0.21 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000157109 N/A N/A N/A 1.468±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000090762 ENSDART00000122567 N/A N/A N/A 7.850±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039239 ENSMUST00000045288 0.900±0.58 0.643±0.08 2.722±0.80 1.432±0.38 0.559±0.35 0.878±0.47 0.675±0.09 0.425±0.30 0.142±0.13 1.830±0.09 1.526±0.32 1.254±0.89 2.349±1.00 0.108±0.06
ENSMUSG00000039246 ENSMUST00000045388 12.134±8.68 19.845±3.51 4.080±0.81 3.301±2.22 9.099±2.98 3.304±0.53 0.837±0.52 47.452±5.25 8.947±4.51 3.301±0.70 0.359±0.10 8.598±3.13 2.670±1.47 2.440±1.19

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