C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00046M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038858-ENSDARG00000071345 CGP 7955 14:49134990-49155148
GeneTranscriptPositionBiotype
ENSDARG00000038858 (setd7)
SET domain containing (lysine methyltransferase) 7 		ENSDART00000056734 (setd7-001) 49134990-49148620 protein_coding
ENSDART00000143158 (setd7-002) 49145421-49148620 retained_intron
ENSDARG00000071345 (mgst2)
microsomal glutathione S-transferase 2 		ENSDART00000105440 (mgst2-201) 49151852-49155118 protein_coding
ENSDART00000136045 (mgst2-001) 49151752-49155129 protein_coding
ENSDART00000142317 (mgst2-002) 49151754-49155148 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00046M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145391-ENSG00000085871 CGP 9606 4:139495941-139740745
GeneTranscriptPositionBiotype
ENSG00000085871 (MGST2)
microsomal glutathione S-transferase 2 		ENST00000265498 (MGST2-001) 139665768-139704253 protein_coding
ENST00000502587 (MGST2-005) 139665997-139679124 retained_intron
ENST00000503816 (MGST2-002) 139666016-139731435 nonsense_mediated_decay
ENST00000506797 (MGST2-006) 139665835-139704224 protein_coding
ENST00000515067 (MGST2-004) 139666028-139704068 processed_transcript
ENST00000515137 (MGST2-003) 139665933-139740745 processed_transcript
ENST00000616265 (MGST2-201) 139665768-139740745 protein_coding
ENSG00000145391 (SETD7)
SET domain containing (lysine methyltransferase) 7 		ENST00000274031 (SETD7-001) 139506036-139556774 protein_coding
ENST00000404104 (SETD7-002) 139532579-139556769 protein_coding
ENST00000406354 (SETD7-003) 139532582-139556208 protein_coding
ENST00000506866 (SETD7-004) 139495941-139556238 protein_coding
ENST00000515101 (SETD7-006) 139496089-139520396 retained_intron
ENST00000608795 (SETD7-008) 139533231-139606699 protein_coding
ENST00000608958 (SETD7-009) 139596608-139606699 protein_coding
ENSG00000178458 (H3F3AP6)
H3 histone, family 3A, pseudogene 6 		ENST00000230495 (H3F3AP6-001) 139698144-139698554 processed_pseudogene
ENSG00000201533 (RN7SKP237)
RNA, 7SK small nuclear pseudogene 237 		ENST00000364663 (RN7SKP237-201) 139685127-139685427 misc_RNA
ENSG00000249302 (FTH1P24)
ferritin, heavy polypeptide 1 pseudogene 24 		ENST00000503502 (FTH1P24-001) 139546266-139546727 processed_pseudogene
ENSG00000261268 (RP11-308D13.3)
 ENST00000561977 (RP11-308D13.3-001) 139618136-139623232 lincRNA
ENSG00000272717 (RP11-342I1.2)
 ENST00000608402 (RP11-342I1.2-001) 139556799-139557643 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00046M_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037111-ENSMUSG00000074604 CGP 10090 3:51515319-51682675
GeneTranscriptPositionBiotype
ENSMUSG00000037111 (Setd7)
SET domain containing (lysine methyltransferase) 7 		ENSMUST00000037141 (Setd7-001) 51515319-51560878 protein_coding
ENSMUST00000161755 (Setd7-002) 51535501-51536596 processed_transcript
ENSMUSG00000074604 (Mgst2)
microsomal glutathione S-transferase 2 		ENSMUST00000099106 (Mgst2-001) 51661179-51682675 protein_coding
ENSMUST00000159400 (Mgst2-009) 51671466-51682670 processed_transcript
ENSMUST00000159554 (Mgst2-005) 51677560-51682674 processed_transcript
ENSMUST00000160753 (Mgst2-003) 51660360-51681807 processed_transcript
ENSMUST00000161230 (Mgst2-002) 51675136-51682674 retained_intron
ENSMUST00000161590 (Mgst2-008) 51661227-51682670 protein_coding
ENSMUST00000161627 (Mgst2-006) 51661178-51677076 processed_transcript
ENSMUST00000162125 (Mgst2-004) 51671915-51682519 processed_transcript
ENSMUST00000162195 (Mgst2-007) 51661215-51662970 processed_transcript
ENSMUSG00000097885 (5031434O11Rik)
RIKEN cDNA 5031434O11 gene 		ENSMUST00000180404 (5031434O11Rik-201) 51560036-51567114 lincRNA
ENSMUST00000180616 (5031434O11Rik-202) 51559757-51567117 lincRNA
ENSMUST00000181303 (5031434O11Rik-203) 51562471-51567105 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046M_0001ENSDARG00000038858ENSDART00000056734ENSDART00000143158ENSDARG00000071345ENSDART00000105440ENSDART00000136045ENSDART00000142317CIL_00046M_0002ENSG00000085871ENST00000265498ENST00000502587ENST00000503816ENST00000506797ENST00000515067ENST00000515137ENST00000616265ENSG00000145391ENST00000274031ENST00000404104ENST00000406354ENST00000506866ENST00000515101ENST00000608795ENST00000608958ENSG00000178458ENST00000230495ENSG00000201533ENST00000364663ENSG00000249302ENST00000503502ENSG00000261268ENST00000561977ENSG00000272717ENST00000608402CIL_00046M_0003ENSMUSG00000037111ENSMUST00000037141ENSMUST00000161755ENSMUSG00000074604ENSMUST00000099106ENSMUST00000159400ENSMUST00000159554ENSMUST00000160753ENSMUST00000161230ENSMUST00000161590ENSMUST00000161627ENSMUST00000162125ENSMUST00000162195ENSMUSG00000097885ENSMUST00000180404ENSMUST00000180616ENSMUST00000181303
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046M_0001ENSDARG00000038858ENSDART00000056734ENSDARG00000071345ENSDART00000105440ENSDART00000136045ENSDART00000142317CIL_00046M_0002ENSG00000085871ENST00000265498ENST00000506797ENST00000515067ENSG00000145391ENST00000274031ENST00000608958ENSG00000178458ENST00000230495ENSG00000201533ENST00000364663ENSG00000249302ENST00000503502ENSG00000261268ENST00000561977ENSG00000272717ENST00000608402CIL_00046M_0003ENSMUSG00000037111ENSMUST00000037141ENSMUSG00000074604ENSMUST00000099106ENSMUST00000159400ENSMUST00000159554ENSMUST00000160753ENSMUST00000161230ENSMUST00000161590ENSMUST00000161627ENSMUST00000162125ENSMUSG00000097885ENSMUST00000180404
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000038858 ENSDART00000056734 N/A N/A N/A 18.530±5.41 N/A N/A 25.825±15.58 28.663±13.73 2.633±0.00 N/A 37.877±0.00 N/A N/A N/A
ENSDART00000143158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000071345 ENSDART00000105440 N/A N/A N/A 0.764±0.04 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000136045 N/A N/A N/A 3.595±1.05 N/A N/A 3.862±1.85 12.075±0.00 5.158±0.00 N/A 5.703±0.00 N/A N/A N/A
ENSDART00000142317 N/A N/A N/A 0.973±0.14 N/A N/A 1.402±0.00 2.209±0.28 0.948±0.00 N/A 1.060±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085871 ENST00000265498 43.165±0.00 44.720±0.00 N/A 3.878±1.05 29.001±0.00 27.642±19.30 20.634±15.57 31.090±3.48 40.648±36.82 9.505±5.60 3.961±2.03 22.311±9.64 41.309±23.65 25.670±18.67
ENST00000502587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506797 N/A N/A 4.485±0.00 3.355±0.00 5.930±0.00 N/A 22.893±0.00 N/A N/A 12.105±0.00 3.914±0.00 36.095±0.00 13.436±0.00 19.718±0.00
ENST00000515067 N/A N/A N/A N/A N/A N/A N/A N/A 36.112±0.00 N/A 4.393±1.36 N/A N/A N/A
ENST00000515137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000145391 ENST00000274031 13.498±0.00 8.172±0.00 0.799±0.00 3.729±2.40 25.361±0.00 9.394±4.38 8.209±5.63 7.137±0.61 8.406±3.26 6.655±0.00 12.373±2.37 3.751±1.49 3.892±1.80 4.093±2.75
ENST00000404104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.878±0.00
ENSG00000178458 ENST00000230495 0.148±0.00 0.310±0.00 0.208±0.00 0.173±0.00 0.833±0.62 0.811±0.71 N/A 1.562±1.45 0.047±0.00 0.050±0.00 0.045±0.00 0.145±0.00 0.322±0.20 0.095±0.00
ENSG00000201533 ENST00000364663 0.067±0.00 0.716±0.00 N/A 0.080±0.00 0.529±0.00 1.022±0.00 0.194±0.00 0.805±0.59 1.914±0.00 N/A N/A 1.739±0.00 N/A 0.394±0.00
ENSG00000249302 ENST00000503502 N/A 0.032±0.00 0.529±0.00 N/A 1.119±0.00 0.387±0.00 0.362±0.00 N/A 0.871±0.00 N/A 1.662±0.00 0.849±0.00 N/A N/A
ENSG00000261268 ENST00000561977 N/A N/A N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A 0.155±0.00 0.036±0.00 N/A
ENSG00000272717 ENST00000608402 0.060±0.00 0.405±0.00 N/A 0.409±0.00 0.266±0.00 0.212±0.00 0.182±0.03 N/A N/A 0.228±0.00 0.056±0.00 0.203±0.15 0.112±0.03 0.220±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037111 ENSMUST00000037141 19.737±1.60 14.215±0.83 23.785±4.52 6.803±3.91 17.020±2.38 13.816±2.20 11.288±0.55 7.393±0.16 1.441±0.49 15.271±0.30 53.548±1.93 20.090±6.91 8.380±4.94 0.828±0.34
ENSMUST00000161755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074604 ENSMUST00000099106 1.576±0.59 1.919±0.64 6.473±1.54 N/A 1.772±0.64 7.847±1.49 0.211±0.09 0.136±0.06 2.959±0.68 1.040±0.21 0.319±0.07 9.013±14.34 6.136±4.14 N/A
ENSMUST00000159400 0.394±0.00 N/A N/A 0.060±0.04 N/A N/A 0.103±0.03 0.071±0.00 0.087±0.00 N/A N/A 0.359±0.00 0.965±0.00 1.163±0.00
ENSMUST00000159554 N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 N/A N/A 0.427±0.13 N/A 7.201±0.55 10.260±0.00
ENSMUST00000160753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.440±0.00 N/A N/A N/A
ENSMUST00000161230 0.212±0.08 1.473±0.46 2.879±1.89 0.018±0.01 0.731±0.23 5.071±1.26 0.057±0.05 0.052±0.02 0.482±0.31 0.604±0.23 0.080±0.05 1.314±2.42 0.876±0.84 0.845±0.37
ENSMUST00000161590 N/A N/A N/A N/A N/A N/A N/A 0.108±0.00 N/A N/A 0.303±0.12 N/A 2.246±0.51 N/A
ENSMUST00000161627 N/A N/A N/A N/A N/A N/A N/A 0.170±0.01 N/A N/A N/A 0.544±0.14 2.984±0.27 N/A
ENSMUST00000162125 N/A N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A 0.188±0.00 0.988±0.05 N/A N/A
ENSMUST00000162195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097885 ENSMUST00000180404 N/A 3.079±0.12 N/A 1.735±0.06 3.849±0.27 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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