C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00049A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000017093-ENSDARG00000032970 CGP 7955 18:30444963-30454519
GeneTranscriptPositionBiotype
ENSDARG00000017093 (emc8)
ER membrane protein complex subunit 8
ENSDART00000028033 (emc8-001) 30444968-30448930 protein_coding
ENSDART00000129509 (emc8-201) 30444963-30448865 protein_coding
ENSDARG00000032970 (cox4i1)
cytochrome c oxidase subunit IV isoform 1
ENSDART00000026866 (cox4i1-001) 30452117-30454519 protein_coding
CIL_00049A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000131148-ENSG00000131143 CGP 9606 16:85771758-85807044
GeneTranscriptPositionBiotype
ENSG00000131143 (COX4I1)
cytochrome c oxidase subunit IV isoform 1
ENST00000253452 (COX4I1-001) 85799684-85807002 protein_coding
ENST00000561569 (COX4I1-009) 85799697-85807002 protein_coding
ENST00000562336 (COX4I1-016) 85799693-85807044 protein_coding
ENST00000562929 (COX4I1-017) 85805069-85807031 processed_transcript
ENST00000563774 (COX4I1-008) 85799696-85805350 retained_intron
ENST00000564544 (COX4I1-015) 85799708-85806975 nonsense_mediated_decay
ENST00000564648 (COX4I1-005) 85801202-85806967 retained_intron
ENST00000564903 (COX4I1-004) 85801202-85806968 protein_coding
ENST00000565078 (COX4I1-006) 85798633-85804992 protein_coding
ENST00000566115 (COX4I1-010) 85799638-85805096 nonsense_mediated_decay
ENST00000566405 (COX4I1-013) 85799698-85806802 protein_coding
ENST00000566617 (COX4I1-007) 85799760-85805309 retained_intron
ENST00000567241 (COX4I1-012) 85799654-85805328 retained_intron
ENST00000567266 (COX4I1-019) 85799697-85805426 retained_intron
ENST00000568339 (COX4I1-003) 85799622-85807002 retained_intron
ENST00000568794 (COX4I1-011) 85799683-85806805 protein_coding
ENST00000569997 (COX4I1-002) 85803057-85807002 retained_intron
ENST00000570123 (COX4I1-014) 85799612-85805742 processed_transcript
ENSG00000131148 (EMC8)
ER membrane protein complex subunit 8
ENST00000253457 (EMC8-001) 85778624-85799540 protein_coding
ENST00000435200 (EMC8-002) 85778624-85799608 protein_coding
ENST00000595980 (EMC8-003) 85771758-85781258 nonsense_mediated_decay
ENST00000596852 (EMC8-006) 85788897-85799396 retained_intron
ENST00000597291 (EMC8-005) 85779398-85781223 retained_intron
ENST00000600807 (EMC8-004) 85779662-85781760 retained_intron
ENSG00000252311 (RNU1-103P)
RNA, U1 small nuclear 103, pseudogene
ENST00000516502 (RNU1-103P-201) 85781775-85781899 snRNA
ENSG00000270159 (RP11-568J23.6)
ENST00000602617 (RP11-568J23.6-001) 85792415-85792933 antisense
ENSG00000270184 (RP11-568J23.5)
ENST00000602706 (RP11-568J23.5-001) 85784382-85787617 antisense
CIL_00049A_0003 (Click to Hide/Show)
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Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Source ID Type Tax ID Position
ENSMUSG00000031819-ENSMUSG00000031818 CGP 10090 8:120653914-120674207
GeneTranscriptPositionBiotype

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049A_0001ENSDARG00000017093ENSDART00000028033ENSDART00000129509ENSDARG00000032970ENSDART00000026866CIL_00049A_0002ENSG00000131143ENST00000253452ENST00000561569ENST00000562336ENST00000562929ENST00000563774ENST00000564544ENST00000564648ENST00000564903ENST00000565078ENST00000566115ENST00000566405ENST00000566617ENST00000567241ENST00000567266ENST00000568339ENST00000568794ENST00000569997ENST00000570123ENSG00000131148ENST00000253457ENST00000435200ENST00000595980ENST00000596852ENST00000597291ENST00000600807ENSG00000252311ENST00000516502ENSG00000270159ENST00000602617ENSG00000270184ENST00000602706
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049A_0001ENSDARG00000017093ENSDART00000028033ENSDART00000129509ENSDARG00000032970ENSDART00000026866CIL_00049A_0002ENSG00000131143ENST00000253452ENST00000562336ENST00000562929ENST00000566405ENST00000570123ENSG00000131148ENST00000253457ENSG00000252311ENST00000516502ENSG00000270159ENST00000602617ENSG00000270184ENST00000602706
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017093 ENSDART00000028033 N/A N/A N/A 11.100±2.16 N/A N/A 7.689±0.03 9.799±0.00 1.866±0.00 N/A 6.504±0.00 N/A N/A N/A
ENSDART00000129509 N/A N/A N/A 4.011±0.00 N/A N/A 21.326±1.54 15.783±1.53 N/A N/A N/A N/A N/A N/A
ENSDARG00000032970 ENSDART00000026866 N/A N/A N/A 461.233±186.77 N/A N/A 442.080±392.90 273.253±0.00 58.137±0.00 N/A 340.103±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000131143 ENST00000253452 175.899±0.00 362.417±0.00 20.510±0.00 180.707±86.54 147.899±131.19 194.505±121.56 371.791±340.21 218.053±174.80 154.159±116.66 188.374±156.78 188.600±123.24 309.037±169.02 489.141±91.18 253.512±18.92
ENST00000561569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562336 N/A N/A N/A 27.970±0.00 4.886±0.00 N/A 17.716±0.00 13.174±0.00 N/A N/A 28.923±0.00 4.891±0.00 N/A N/A
ENST00000562929 N/A N/A N/A N/A N/A N/A N/A N/A 22.523±0.00 N/A N/A 195.707±0.00 196.868±61.34 107.014±0.00
ENST00000563774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566405 73.303±0.00 N/A 14.211±0.00 156.677±0.00 53.598±42.80 N/A 19.493±0.00 N/A N/A N/A N/A 13.146±0.00 N/A N/A
ENST00000566617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570123 N/A N/A N/A N/A N/A N/A 22.384±0.00 N/A N/A N/A 45.517±0.00 12.235±0.00 N/A N/A
ENSG00000131148 ENST00000253457 N/A N/A N/A N/A 2.250±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252311 ENST00000516502 N/A 0.954±0.00 N/A 0.609±0.00 0.195±0.00 0.352±0.00 0.164±0.00 N/A N/A N/A N/A 1.200±0.67 N/A 1.027±0.00
ENSG00000270159 ENST00000602617 N/A 0.266±0.00 N/A N/A 0.170±0.00 N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A 4.097±0.36
ENSG00000270184 ENST00000602706 0.414±0.00 0.348±0.00 0.170±0.00 0.315±0.00 0.350±0.12 0.383±0.00 0.133±0.00 0.531±0.24 0.405±0.00 0.159±0.00 N/A 0.336±0.22 0.081±0.00 0.191±0.00

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