C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176029-ENSG00000176009 CGP 9606 11:8920076-8938211
GeneTranscriptPositionBiotype
ENSG00000166452 (AKIP1)
A kinase (PRKA) interacting protein 1 		ENST00000299576 (AKIP1-005) 8911139-8920084 protein_coding
ENST00000309357 (AKIP1-004) 8911154-8920084 protein_coding
ENST00000309377 (AKIP1-001) 8911140-8920084 protein_coding
ENST00000396648 (AKIP1-009) 8911338-8919900 protein_coding
ENST00000524577 (AKIP1-006) 8911199-8917416 protein_coding
ENST00000525005 (AKIP1-002) 8911192-8917748 protein_coding
ENST00000529876 (AKIP1-003) 8911189-8918119 protein_coding
ENST00000529942 (AKIP1-011) 8911465-8919537 protein_coding
ENST00000530281 (AKIP1-008) 8911288-8919414 protein_coding
ENST00000534147 (AKIP1-010) 8911443-8919862 protein_coding
ENST00000534506 (AKIP1-007) 8911199-8917504 protein_coding
ENSG00000176009 (ASCL3)
achaete-scute family bHLH transcription factor 3 		ENST00000531618 (ASCL3-001) 8937579-8938211 protein_coding
ENSG00000176029 (C11orf16)
chromosome 11 open reading frame 16 		ENST00000326053 (C11orf16-001) 8920076-8932989 protein_coding
ENST00000525780 (C11orf16-002) 8920076-8932988 protein_coding
ENST00000526227 (C11orf16-004) 8927571-8932983 protein_coding
ENST00000527607 (C11orf16-003) 8928901-8933006 retained_intron
ENST00000528830 (C11orf16-005) 8927154-8932950 nonsense_mediated_decay
ENST00000528998 (C11orf16-006) 8927100-8932947 processed_transcript

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_00049D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031022-ENSMUSG00000035951 CGP 10090 7:109712181-109731732
GeneTranscriptPositionBiotype
ENSMUSG00000031022 (BC051019)
cDNA sequence BC051019 		ENSMUST00000033334 (BC051019-001) 109712184-109723850 protein_coding
ENSMUST00000106735 (BC051019-002) 109712181-109723786 protein_coding
ENSMUST00000145211 (BC051019-003) 109715908-109721016 protein_coding
ENSMUSG00000031023 (Akip1)
A kinase (PRKA) interacting protein 1 		ENSMUST00000033335 (Akip1-001) 109703690-109712189 protein_coding
ENSMUST00000143581 (Akip1-002) 109703752-109708973 protein_coding
ENSMUST00000147497 (Akip1-003) 109708833-109711968 processed_transcript
ENSMUSG00000035951 (Ascl3)
achaete-scute complex homolog 3 (Drosophila) 		ENSMUST00000035372 (Ascl3-201) 109727465-109731732 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049D_0001ENSG00000166452ENST00000299576ENST00000309357ENST00000309377ENST00000396648ENST00000524577ENST00000525005ENST00000529876ENST00000529942ENST00000530281ENST00000534147ENST00000534506ENSG00000176009ENST00000531618ENSG00000176029ENST00000326053ENST00000525780ENST00000526227ENST00000527607ENST00000528830ENST00000528998CIL_00049D_0002ENSMUSG00000031022ENSMUST00000033334ENSMUST00000106735ENSMUST00000145211ENSMUSG00000031023ENSMUST00000033335ENSMUST00000143581ENSMUST00000147497ENSMUSG00000035951ENSMUST00000035372
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049D_0001ENSG00000166452ENST00000299576ENST00000309377ENST00000396648ENST00000524577ENST00000529876ENST00000529942ENST00000530281ENST00000534147ENST00000534506ENSG00000176009ENST00000531618ENSG00000176029ENST00000326053ENST00000527607CIL_00049D_0002ENSMUSG00000031022ENSMUST00000033334ENSMUST00000145211ENSMUSG00000031023ENSMUST00000033335ENSMUST00000143581ENSMUST00000147497ENSMUSG00000035951ENSMUST00000035372
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166452 ENST00000299576 2.785±0.00 2.371±0.00 0.407±0.00 2.920±0.86 2.024±1.21 4.873±0.00 1.914±1.04 4.052±0.61 1.395±0.42 4.009±0.00 1.733±0.86 6.609±2.17 6.715±0.92 7.366±1.19
ENST00000309357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000309377 N/A N/A N/A N/A 0.315±0.00 N/A N/A N/A 0.223±0.00 N/A N/A 3.787±0.00 3.741±0.30 N/A
ENST00000396648 N/A 2.267±0.00 N/A 4.319±0.00 2.373±0.00 N/A 0.161±0.00 1.754±0.00 N/A N/A N/A 3.213±0.16 2.032±0.00 2.508±0.00
ENST00000524577 3.676±0.00 3.385±0.00 N/A 1.906±0.00 2.066±0.38 N/A 0.826±0.00 N/A 0.894±0.00 N/A 1.113±0.00 3.267±0.00 N/A N/A
ENST00000525005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529876 N/A N/A N/A N/A N/A N/A N/A N/A 0.340±0.00 N/A N/A N/A N/A N/A
ENST00000529942 3.557±0.00 3.435±0.00 N/A 4.897±0.00 2.581±0.00 3.869±2.48 3.178±0.00 1.835±0.00 N/A N/A 4.767±1.92 4.536±0.00 N/A 7.232±0.00
ENST00000530281 N/A N/A 0.263±0.00 N/A N/A N/A 2.413±0.00 4.061±0.00 1.457±0.00 N/A 3.659±0.00 N/A N/A N/A
ENST00000534147 2.550±0.00 1.586±0.00 N/A 2.340±0.00 N/A 1.641±0.56 2.288±0.00 1.851±0.00 1.457±0.00 1.539±0.99 N/A 7.247±3.39 4.398±1.21 5.273±1.72
ENST00000534506 N/A N/A N/A 2.143±0.00 N/A N/A N/A N/A 0.425±0.00 0.906±0.00 N/A N/A N/A N/A
ENSG00000176009 ENST00000531618 0.056±0.00 0.116±0.00 N/A N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A 0.387±0.37 N/A 0.267±0.19
ENSG00000176029 ENST00000326053 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.619±0.25 N/A 1.414±0.00
ENST00000525780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527607 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.495±0.00 N/A N/A N/A N/A
ENST00000528830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031022 ENSMUST00000033334 N/A N/A N/A N/A N/A N/A 0.655±0.05 N/A N/A 9.837±1.26 N/A 3.938±2.27 N/A N/A
ENSMUST00000106735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.196±0.00 N/A N/A
ENSMUSG00000031023 ENSMUST00000033335 6.005±1.08 4.537±1.59 11.020±1.39 2.828±0.55 5.162±1.08 5.173±0.92 3.215±0.77 10.166±1.77 10.238±4.35 9.584±0.54 6.208±0.56 8.391±4.32 14.485±6.74 17.282±3.44
ENSMUST00000143581 1.340±0.00 N/A N/A 2.006±0.36 1.354±0.03 1.038±0.00 N/A N/A N/A N/A N/A N/A 3.962±0.00 N/A
ENSMUST00000147497 4.624±0.00 3.544±0.00 N/A N/A 4.596±0.70 N/A N/A 6.378±0.48 8.784±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000035951 ENSMUST00000035372 0.164±0.15 0.421±0.16 0.077±0.01 0.035±0.00 0.210±0.12 0.236±0.09 0.046±0.01 0.470±0.23 0.056±0.05 0.253±0.07 0.051±0.00 0.179±0.07 0.495±0.41 0.419±0.25

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