C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: achaete-scute family bHLH transcription factor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000176009 ASCL3 9606 - 11:8937579-8938211 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000531618 ASCL3-001 8937579-8938211 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonOvaryTestisENST00000531618
Transcript ID Adipose Adrenal Colon Ovary Testis
ENST00000531618 0.056±0.00 0.116±0.00 0.099±0.00 0.387±0.37 0.267±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Q2 CIL_0008Q2_0001 VISTA 11:8432154-9033661
CIL_00049D CIL_00049D_0001 CGP 11:8920076-8938211
CIL_0002U3 CIL_0002U3_0001 CGP 11:8937579-8965011

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 ISS DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 ISS transcription, DNA-templated
GO:0006357 ISS regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089096 ASCL4 achaete-scute family bHLH transcription factor 3 protein_coding Danio_rerio
ENSMUSG00000035951 Ascl3 achaete-scute complex homolog 3 (Drosophila) protein_coding Mus_musculus

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