C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007271-ENSDARG00000062235 CGP 7955 24:27125389-27148652
GeneTranscriptPositionBiotype
ENSDARG00000007271 (mynn)
myoneurin 		ENSDART00000003884 (mynn-001) 27125389-27139506 protein_coding
ENSDART00000145637 (mynn-003) 27134225-27139805 protein_coding
ENSDART00000145752 (mynn-002) 27125620-27129899 protein_coding
ENSDARG00000062235 (lrrc34)
leucine rich repeat containing 34 		ENSDART00000089756 (lrrc34-001) 27142029-27148652 protein_coding
ENSDART00000138442 (lrrc34-002) 27142029-27144415 retained_intron
CIL_00049L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000085274-ENSG00000171757 CGP 9606 3:169772831-169812986
GeneTranscriptPositionBiotype
ENSG00000085274 (MYNN)
myoneurin 		ENST00000349841 (MYNN-001) 169772831-169789181 protein_coding
ENST00000356716 (MYNN-002) 169773427-169787544 protein_coding
ENST00000544106 (MYNN-201) 169774265-169789716 protein_coding
ENST00000602391 (MYNN-003) 169779289-169784676 nonsense_mediated_decay
ENST00000602751 (MYNN-004) 169773405-169787502 nonsense_mediated_decay
ENSG00000171757 (LRRC34)
leucine rich repeat containing 34 		ENST00000446859 (LRRC34-003) 169793428-169812664 protein_coding
ENST00000518252 (LRRC34-009) 169793485-169796346 processed_transcript
ENST00000520726 (LRRC34-007) 169803971-169808719 retained_intron
ENST00000522080 (LRRC34-004) 169795780-169812525 retained_intron
ENST00000522329 (LRRC34-010) 169793488-169796901 processed_transcript
ENST00000522526 (LRRC34-005) 169793473-169812986 protein_coding
ENST00000522596 (LRRC34-002) 169793473-169812690 retained_intron
ENST00000522830 (LRRC34-001) 169793473-169812932 protein_coding
ENST00000524054 (LRRC34-006) 169796745-169812514 processed_transcript
ENST00000524327 (LRRC34-008) 169796165-169808079 processed_transcript
ENST00000528597 (LRRC34-011) 169793527-169796899 protein_coding
ENST00000602774 (LRRC34-012) 169796460-169797038 processed_transcript
ENSG00000269984 (RP11-362K14.5)
 ENST00000602342 (RP11-362K14.5-001) 169777192-169780334 antisense
ENSG00000270096 (RP11-362K14.6)
 ENST00000602835 (RP11-362K14.6-001) 169794962-169796213 antisense
ENSG00000270135 (RP11-362K14.7)
 ENST00000602913 (RP11-362K14.7-001) 169793495-169793966 antisense
CIL_00049L_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037730-ENSMUSG00000027702 CGP 10090 3:30602087-30647869
GeneTranscriptPositionBiotype
ENSMUSG00000027702 (Lrrc34)
leucine rich repeat containing 34 		ENSMUST00000029252 (Lrrc34-001) 30624267-30647869 protein_coding
ENSMUSG00000027703 (Lrriq4)
leucine-rich repeats and IQ motif containing 4 		ENSMUST00000108265 (Lrriq4-002) 30647886-30672299 protein_coding
ENSMUST00000108267 (Lrriq4-001) 30644507-30672431 protein_coding
ENSMUST00000172350 (Lrriq4-201) 30645330-30672299 protein_coding
ENSMUSG00000037730 (Mynn)
myoneurin 		ENSMUST00000047502 (Mynn-201) 30602087-30618492 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049L_0001ENSDARG00000007271ENSDART00000003884ENSDART00000145637ENSDART00000145752ENSDARG00000062235ENSDART00000089756ENSDART00000138442CIL_00049L_0002ENSG00000085274ENST00000349841ENST00000356716ENST00000544106ENST00000602391ENST00000602751ENSG00000171757ENST00000446859ENST00000518252ENST00000520726ENST00000522080ENST00000522329ENST00000522526ENST00000522596ENST00000522830ENST00000524054ENST00000524327ENST00000528597ENST00000602774ENSG00000269984ENST00000602342ENSG00000270096ENST00000602835ENSG00000270135ENST00000602913CIL_00049L_0003ENSMUSG00000027702ENSMUST00000029252ENSMUSG00000027703ENSMUST00000108265ENSMUST00000108267ENSMUST00000172350ENSMUSG00000037730ENSMUST00000047502
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049L_0001ENSDARG00000007271ENSDART00000003884ENSDART00000145637ENSDARG00000062235ENSDART00000089756ENSDART00000138442CIL_00049L_0002ENSG00000085274ENST00000349841ENST00000356716ENST00000544106ENST00000602751ENSG00000171757ENST00000446859ENST00000520726ENST00000522080ENST00000522329ENST00000522526ENST00000522596ENST00000522830ENST00000524054ENST00000524327ENST00000602774ENSG00000269984ENST00000602342ENSG00000270096ENST00000602835ENSG00000270135ENST00000602913CIL_00049L_0003ENSMUSG00000027702ENSMUST00000029252ENSMUSG00000027703ENSMUST00000108265ENSMUST00000172350ENSMUSG00000037730ENSMUST00000047502
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007271 ENSDART00000003884 N/A N/A N/A 2.037±1.20 N/A N/A 2.385±1.87 8.615±0.00 0.375±0.00 N/A N/A N/A N/A N/A
ENSDART00000145637 N/A N/A N/A 2.970±0.00 N/A N/A 1.685±0.95 8.970±1.04 0.163±0.00 N/A N/A N/A N/A N/A
ENSDART00000145752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000062235 ENSDART00000089756 N/A N/A N/A 0.579±0.14 N/A N/A N/A 1.174±0.00 0.069±0.00 N/A N/A N/A N/A N/A
ENSDART00000138442 N/A N/A N/A 0.230±0.19 N/A N/A 0.191±0.21 0.225±0.01 0.035±0.00 N/A 0.046±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085274 ENST00000349841 0.597±0.00 1.032±0.00 0.219±0.00 0.525±0.00 0.863±0.02 0.777±0.29 0.477±0.21 0.871±0.00 0.693±0.21 0.807±0.00 1.082±0.00 1.117±0.39 0.454±0.19 1.231±0.06
ENST00000356716 N/A 0.557±0.00 N/A 0.881±0.00 N/A N/A 0.217±0.00 N/A N/A N/A 0.297±0.00 1.208±0.60 0.447±0.08 2.264±0.66
ENST00000544106 0.239±0.00 0.494±0.00 0.438±0.00 N/A 0.875±0.00 N/A 0.152±0.00 N/A N/A 0.906±0.00 N/A 0.385±0.00 N/A N/A
ENST00000602391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602751 0.739±0.00 N/A N/A 0.628±0.00 1.183±0.39 1.611±0.00 1.596±0.00 1.348±0.79 0.979±0.23 1.817±0.00 0.854±0.46 0.945±0.04 0.499±0.06 2.241±0.00
ENSG00000171757 ENST00000446859 N/A N/A 0.065±0.00 N/A N/A N/A 0.081±0.00 N/A N/A 0.338±0.00 N/A N/A 0.084±0.00 1.718±0.36
ENST00000518252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520726 N/A N/A N/A N/A N/A N/A 0.351±0.00 0.802±0.00 0.734±0.00 N/A N/A 1.271±0.00 N/A 4.866±0.00
ENST00000522080 N/A N/A N/A 0.613±0.00 N/A N/A N/A N/A N/A 0.150±0.00 N/A 0.539±0.00 N/A N/A
ENST00000522329 N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A
ENST00000522596 N/A 0.256±0.00 N/A 0.137±0.00 N/A 0.059±0.05 0.008±0.00 N/A N/A N/A N/A 0.263±0.00 0.052±0.04 N/A
ENST00000522830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.944±0.00
ENST00000524054 N/A N/A 0.808±0.00 N/A 0.536±0.00 0.231±0.07 0.062±0.00 N/A N/A N/A N/A 2.980±0.00 0.219±0.00 10.465±6.27
ENST00000524327 0.841±0.00 N/A N/A 1.248±0.00 0.844±0.00 N/A N/A N/A N/A 0.932±0.00 N/A N/A N/A 4.682±0.00
ENST00000528597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602774 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.611±0.00 N/A N/A N/A N/A
ENSG00000269984 ENST00000602342 N/A 1.001±0.00 0.348±0.00 0.867±0.13 N/A N/A 0.551±0.36 1.072±0.00 N/A 1.029±0.00 0.770±0.38 1.148±0.11 0.808±0.00 2.193±0.00
ENSG00000270096 ENST00000602835 N/A 0.883±0.00 N/A 0.682±0.00 0.694±0.09 0.136±0.05 0.126±0.00 0.297±0.00 0.178±0.00 0.497±0.00 0.145±0.00 1.732±0.34 0.133±0.03 1.451±0.00
ENSG00000270135 ENST00000602913 0.788±0.00 1.054±0.00 N/A 1.768±0.00 1.403±0.00 N/A N/A N/A N/A 1.203±0.00 N/A 4.022±0.00 0.142±0.00 6.512±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027702 ENSMUST00000029252 0.101±0.04 0.120±0.00 N/A 0.124±0.02 N/A N/A 0.044±0.02 0.095±0.03 0.041±0.02 0.705±0.18 0.026±0.00 0.748±0.67 0.085±0.05 61.383±24.52
ENSMUSG00000027703 ENSMUST00000108265 N/A N/A N/A N/A N/A N/A N/A 0.110±0.04 N/A N/A N/A N/A 0.020±0.00 16.614±4.61
ENSMUST00000108267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172350 0.048±0.00 N/A N/A N/A N/A 0.035±0.00 0.016±0.00 0.166±0.10 N/A N/A N/A 0.342±0.14 N/A N/A
ENSMUSG00000037730 ENSMUST00000047502 3.040±0.72 2.611±0.43 4.510±0.00 3.746±1.91 3.870±1.18 2.217±0.69 1.379±0.20 3.104±1.14 2.189±0.91 2.825±0.81 2.015±0.22 4.553±1.10 3.892±1.17 1.607±0.59

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