C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 34
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000171757 LRRC34 9606 - 3:169793428-169812986 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000446859 LRRC34-003 169793428-169812664 protein_coding
  ENST00000518252 LRRC34-009 169793485-169796346 processed_transcript
  ENST00000520726 LRRC34-007 169803971-169808719 retained_intron
  ENST00000522080 LRRC34-004 169795780-169812525 retained_intron
  ENST00000522329 LRRC34-010 169793488-169796901 processed_transcript
  ENST00000522526 LRRC34-005 169793473-169812986 protein_coding
  ENST00000522596 LRRC34-002 169793473-169812690 retained_intron
  ENST00000522830 LRRC34-001 169793473-169812932 protein_coding
  ENST00000524054 LRRC34-006 169796745-169812514 processed_transcript
  ENST00000524327 LRRC34-008 169796165-169808079 processed_transcript
  ENST00000528597 LRRC34-011 169793527-169796899 protein_coding
  ENST00000602774 LRRC34-012 169796460-169797038 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000446859ENST00000520726ENST00000522080ENST00000522329ENST00000522526ENST00000522596ENST00000522830ENST00000524054ENST00000524327ENST00000602774
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000446859 N/A N/A 0.065±0.00 N/A N/A N/A 0.081±0.00 N/A N/A 0.338±0.00 N/A 0.084±0.00 1.718±0.36
ENST00000520726 N/A N/A N/A N/A N/A N/A 0.351±0.00 0.802±0.00 0.734±0.00 N/A 1.271±0.00 N/A 4.866±0.00
ENST00000522080 N/A N/A N/A 0.613±0.00 N/A N/A N/A N/A N/A 0.150±0.00 0.539±0.00 N/A N/A
ENST00000522329 N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A
ENST00000522596 N/A 0.256±0.00 N/A 0.137±0.00 N/A 0.059±0.05 0.008±0.00 N/A N/A N/A 0.263±0.00 0.052±0.04 N/A
ENST00000522830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.944±0.00
ENST00000524054 N/A N/A 0.808±0.00 N/A 0.536±0.00 0.231±0.07 0.062±0.00 N/A N/A N/A 2.980±0.00 0.219±0.00 10.465±6.27
ENST00000524327 0.841±0.00 N/A N/A 1.248±0.00 0.844±0.00 N/A N/A N/A N/A 0.932±0.00 N/A N/A 4.682±0.00
ENST00000602774 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.611±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049L CIL_00049L_0002 CGP 3:169772831-169812986
CIL_0004EV CIL_0004EV_0001 CGP 3:169793428-169837775

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062235 lrrc34 leucine rich repeat containing 34 protein_coding Danio_rerio
ENSMUSG00000027702 Lrrc34 leucine rich repeat containing 34 protein_coding Mus_musculus

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