C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004EV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171757-ENSG00000188306 CGP 9606 3:169793428-169837775
GeneTranscriptPositionBiotype
ENSG00000171757 (LRRC34)
leucine rich repeat containing 34 		ENST00000446859 (LRRC34-003) 169793428-169812664 protein_coding
ENST00000518252 (LRRC34-009) 169793485-169796346 processed_transcript
ENST00000520726 (LRRC34-007) 169803971-169808719 retained_intron
ENST00000522080 (LRRC34-004) 169795780-169812525 retained_intron
ENST00000522329 (LRRC34-010) 169793488-169796901 processed_transcript
ENST00000522526 (LRRC34-005) 169793473-169812986 protein_coding
ENST00000522596 (LRRC34-002) 169793473-169812690 retained_intron
ENST00000522830 (LRRC34-001) 169793473-169812932 protein_coding
ENST00000524054 (LRRC34-006) 169796745-169812514 processed_transcript
ENST00000524327 (LRRC34-008) 169796165-169808079 processed_transcript
ENST00000528597 (LRRC34-011) 169793527-169796899 protein_coding
ENST00000602774 (LRRC34-012) 169796460-169797038 processed_transcript
ENSG00000188306 (LRRIQ4)
leucine-rich repeats and IQ motif containing 4 		ENST00000340806 (LRRIQ4-001) 169821922-169837775 protein_coding
ENSG00000270096 (RP11-362K14.6)
 ENST00000602835 (RP11-362K14.6-001) 169794962-169796213 antisense
ENSG00000270135 (RP11-362K14.7)
 ENST00000602913 (RP11-362K14.7-001) 169793495-169793966 antisense
CIL_0004EV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027702-ENSMUSG00000027703 CGP 10090 3:30624267-30672431
GeneTranscriptPositionBiotype
ENSMUSG00000027702 (Lrrc34)
leucine rich repeat containing 34 		ENSMUST00000029252 (Lrrc34-001) 30624267-30647869 protein_coding
ENSMUSG00000027703 (Lrriq4)
leucine-rich repeats and IQ motif containing 4 		ENSMUST00000108265 (Lrriq4-002) 30647886-30672299 protein_coding
ENSMUST00000108267 (Lrriq4-001) 30644507-30672431 protein_coding
ENSMUST00000172350 (Lrriq4-201) 30645330-30672299 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004EV_0001ENSG00000171757ENST00000446859ENST00000518252ENST00000520726ENST00000522080ENST00000522329ENST00000522526ENST00000522596ENST00000522830ENST00000524054ENST00000524327ENST00000528597ENST00000602774ENSG00000188306ENST00000340806ENSG00000270096ENST00000602835ENSG00000270135ENST00000602913CIL_0004EV_0002ENSMUSG00000027702ENSMUST00000029252ENSMUSG00000027703ENSMUST00000108265ENSMUST00000108267ENSMUST00000172350
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004EV_0001ENSG00000171757ENST00000446859ENST00000520726ENST00000522080ENST00000522329ENST00000522526ENST00000522596ENST00000522830ENST00000524054ENST00000524327ENST00000602774ENSG00000188306ENST00000340806ENSG00000270096ENST00000602835ENSG00000270135ENST00000602913CIL_0004EV_0002ENSMUSG00000027702ENSMUST00000029252ENSMUSG00000027703ENSMUST00000108265ENSMUST00000172350
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171757 ENST00000446859 N/A N/A 0.065±0.00 N/A N/A N/A 0.081±0.00 N/A N/A 0.338±0.00 N/A N/A 0.084±0.00 1.718±0.36
ENST00000518252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520726 N/A N/A N/A N/A N/A N/A 0.351±0.00 0.802±0.00 0.734±0.00 N/A N/A 1.271±0.00 N/A 4.866±0.00
ENST00000522080 N/A N/A N/A 0.613±0.00 N/A N/A N/A N/A N/A 0.150±0.00 N/A 0.539±0.00 N/A N/A
ENST00000522329 N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A
ENST00000522596 N/A 0.256±0.00 N/A 0.137±0.00 N/A 0.059±0.05 0.008±0.00 N/A N/A N/A N/A 0.263±0.00 0.052±0.04 N/A
ENST00000522830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.944±0.00
ENST00000524054 N/A N/A 0.808±0.00 N/A 0.536±0.00 0.231±0.07 0.062±0.00 N/A N/A N/A N/A 2.980±0.00 0.219±0.00 10.465±6.27
ENST00000524327 0.841±0.00 N/A N/A 1.248±0.00 0.844±0.00 N/A N/A N/A N/A 0.932±0.00 N/A N/A N/A 4.682±0.00
ENST00000528597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602774 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.611±0.00 N/A N/A N/A N/A
ENSG00000188306 ENST00000340806 0.023±0.00 N/A 0.024±0.00 0.017±0.00 0.186±0.17 0.057±0.00 0.076±0.00 0.031±0.00 N/A 0.083±0.00 N/A 0.097±0.05 N/A 1.526±0.70
ENSG00000270096 ENST00000602835 N/A 0.883±0.00 N/A 0.682±0.00 0.694±0.09 0.136±0.05 0.126±0.00 0.297±0.00 0.178±0.00 0.497±0.00 0.145±0.00 1.732±0.34 0.133±0.03 1.451±0.00
ENSG00000270135 ENST00000602913 0.788±0.00 1.054±0.00 N/A 1.768±0.00 1.403±0.00 N/A N/A N/A N/A 1.203±0.00 N/A 4.022±0.00 0.142±0.00 6.512±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027702 ENSMUST00000029252 0.101±0.04 0.120±0.00 N/A 0.124±0.02 N/A N/A 0.044±0.02 0.095±0.03 0.041±0.02 0.705±0.18 0.026±0.00 0.748±0.67 0.085±0.05 61.383±24.52
ENSMUSG00000027703 ENSMUST00000108265 N/A N/A N/A N/A N/A N/A N/A 0.110±0.04 N/A N/A N/A N/A 0.020±0.00 16.614±4.61
ENSMUST00000108267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172350 0.048±0.00 N/A N/A N/A N/A 0.035±0.00 0.016±0.00 0.166±0.10 N/A N/A N/A 0.342±0.14 N/A N/A

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