C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004FI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119402-ENSG00000095261 CGP 9606 9:120751978-120842984
GeneTranscriptPositionBiotype
ENSG00000095261 (PSMD5)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 		ENST00000210313 (PSMD5-001) 120816053-120842984 protein_coding
ENST00000373903 (PSMD5-004) 120824130-120826894 retained_intron
ENST00000373904 (PSMD5-007) 120817796-120842951 protein_coding
ENST00000373920 (PSMD5-003) 120815496-120824518 protein_coding
ENST00000471789 (PSMD5-006) 120831670-120842882 retained_intron
ENST00000476949 (PSMD5-002) 120831367-120842911 nonsense_mediated_decay
ENST00000496688 (PSMD5-005) 120826595-120831401 retained_intron
ENSG00000119402 (FBXW2)
F-box and WD repeat domain containing 2 		ENST00000453291 (FBXW2-003) 120771411-120793382 protein_coding
ENST00000474117 (FBXW2-005) 120776089-120793367 processed_transcript
ENST00000476481 (FBXW2-004) 120788016-120793380 processed_transcript
ENST00000493559 (FBXW2-001) 120751978-120776655 processed_transcript
ENST00000608872 (FBXW2-002) 120756974-120793412 protein_coding
ENSG00000214654 (RP11-27I1.4)
 ENST00000437707 (RP11-27I1.4-002) 120793551-120798632 processed_transcript
ENST00000464488 (RP11-27I1.4-001) 120798554-120799570 transcribed_processed_pseudogene
ENSG00000270917 (RP11-27I1.6)
 ENST00000603920 (RP11-27I1.6-001) 120812475-120812845 processed_pseudogene
CIL_0004FI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035949-ENSMUSG00000026869 CGP 10090 2:34804514-34874968
GeneTranscriptPositionBiotype
ENSMUSG00000026869 (Psmd5)
proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 		ENSMUST00000028225 (Psmd5-001) 34852088-34870939 protein_coding
ENSMUST00000135575 (Psmd5-003) 34852443-34857691 protein_coding
ENSMUST00000143456 (Psmd5-002) 34852102-34870933 retained_intron
ENSMUST00000189715 (Psmd5-004) 34866939-34874968 processed_transcript
ENSMUSG00000026870 (Cutal)
cutA divalent cation tolerance homolog-like 		ENSMUST00000028228 (Cutal-003) 34874518-34892132 antisense
ENSMUST00000047447 (Cutal-201) 34874476-34892060 protein_coding
ENSMUST00000113068 (Cutal-202) 34874436-34892133 protein_coding
ENSMUST00000149250 (Cutal-004) 34874459-34882527 antisense
ENSMUST00000184164 (Cutal-002) 34874476-34892060 antisense
ENSMUST00000185249 (Cutal-001) 34874396-34892059 antisense
ENSMUSG00000035949 (Fbxw2)
F-box and WD-40 domain protein 2 		ENSMUST00000028220 (Fbxw2-001) 34805178-34826073 protein_coding
ENSMUST00000091020 (Fbxw2-002) 34805339-34826235 protein_coding
ENSMUST00000113075 (Fbxw2-004) 34806253-34826201 protein_coding
ENSMUST00000113077 (Fbxw2-005) 34805341-34826071 protein_coding
ENSMUST00000113078 (Fbxw2-006) 34805338-34823181 protein_coding
ENSMUST00000113080 (Fbxw2-003) 34805341-34826230 protein_coding
ENSMUST00000126051 (Fbxw2-013) 34825263-34826215 processed_transcript
ENSMUST00000131534 (Fbxw2-007) 34811839-34826311 processed_transcript
ENSMUST00000134323 (Fbxw2-008) 34815268-34826217 processed_transcript
ENSMUST00000145180 (Fbxw2-012) 34807278-34808663 processed_transcript
ENSMUST00000145660 (Fbxw2-010) 34812738-34826167 processed_transcript
ENSMUST00000150865 (Fbxw2-011) 34822604-34826022 processed_transcript
ENSMUST00000156130 (Fbxw2-009) 34804514-34822920 processed_transcript
ENSMUSG00000081904 (Gm13419)
predicted gene 13419 		ENSMUST00000121711 (Gm13419-001) 34830930-34831110 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FI_0001ENSG00000095261ENST00000210313ENST00000373903ENST00000373904ENST00000373920ENST00000471789ENST00000476949ENST00000496688ENSG00000119402ENST00000453291ENST00000474117ENST00000476481ENST00000493559ENST00000608872ENSG00000214654ENST00000437707ENST00000464488ENSG00000270917ENST00000603920CIL_0004FI_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FI_0001ENSG00000095261ENST00000210313ENST00000373904ENSG00000119402ENST00000453291ENST00000474117ENST00000608872ENSG00000214654ENST00000437707ENST00000464488ENSG00000270917ENST00000603920CIL_0004FI_0002ENSMUSG00000026869ENSMUST00000028225ENSMUST00000135575ENSMUSG00000026870ENSMUST00000028228ENSMUST00000047447ENSMUST00000113068ENSMUST00000149250ENSMUST00000184164ENSMUST00000185249ENSMUSG00000035949ENSMUST00000028220ENSMUST00000091020ENSMUST00000113075ENSMUST00000113078ENSMUST00000113080ENSMUST00000126051ENSMUST00000131534ENSMUST00000145660ENSMUST00000156130ENSMUSG00000081904ENSMUST00000121711
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095261 ENST00000210313 6.401±0.00 7.930±0.00 0.537±0.00 4.331±0.15 5.361±1.43 4.468±0.97 1.915±0.97 4.266±0.75 5.289±0.55 2.049±0.93 2.100±1.76 9.152±2.52 5.095±1.41 8.386±0.23
ENST00000373903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373904 N/A N/A 1.492±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119402 ENST00000453291 N/A N/A 4.355±0.00 N/A 8.089±0.00 5.557±0.00 5.587±0.00 N/A 8.250±0.00 6.824±0.00 N/A N/A 5.415±0.90 N/A
ENST00000474117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.838±0.00 14.468±0.00 11.367±0.00 19.849±0.00
ENST00000476481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608872 4.150±0.00 1.092±0.00 N/A 2.223±0.00 3.418±0.55 0.861±0.09 1.107±0.80 3.044±0.00 0.525±0.00 3.206±2.10 2.008±0.00 4.895±1.16 2.777±0.68 2.483±0.00
ENSG00000214654 ENST00000437707 N/A N/A 1.624±0.00 0.830±0.00 1.078±0.00 N/A 0.640±0.00 1.933±0.00 0.628±0.00 0.112±0.00 N/A N/A 0.366±0.00 N/A
ENST00000464488 N/A N/A 1.301±0.00 0.158±0.00 0.455±0.00 N/A N/A 0.457±0.00 0.494±0.35 0.198±0.00 N/A 0.745±0.56 0.354±0.00 N/A
ENSG00000270917 ENST00000603920 0.248±0.00 1.691±0.00 N/A 0.170±0.07 0.128±0.00 0.042±0.00 N/A 0.045±0.00 0.079±0.00 0.342±0.00 0.161±0.00 0.532±0.14 0.249±0.13 0.667±0.14
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026869 ENSMUST00000028225 18.950±1.32 25.474±3.14 20.797±3.41 17.487±9.89 16.441±2.25 13.472±0.84 5.452±0.42 16.708±2.55 21.669±12.32 14.017±1.44 5.967±0.36 19.883±4.08 18.325±8.98 4.161±1.66
ENSMUST00000135575 N/A N/A N/A 11.624±0.00 N/A N/A N/A N/A N/A N/A N/A 15.131±0.00 13.199±4.71 2.383±0.00
ENSMUST00000143456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026870 ENSMUST00000028228 N/A N/A N/A 0.007±0.00 N/A N/A 0.019±0.00 N/A N/A N/A 0.065±0.01 0.383±0.00 0.019±0.00 0.228±0.00
ENSMUST00000047447 N/A N/A N/A N/A N/A N/A 0.090±0.02 N/A N/A N/A 0.025±0.00 N/A N/A 0.038±0.00
ENSMUST00000113068 N/A N/A N/A 0.039±0.00 0.892±0.63 N/A N/A N/A 0.426±0.00 N/A 0.043±0.00 0.272±0.04 0.311±0.15 N/A
ENSMUST00000149250 1.091±0.54 0.997±0.26 N/A N/A 7.599±2.24 212.673±63.53 0.621±0.11 101.199±30.83 137.566±8.38 13.530±2.09 0.259±0.00 2.925±1.12 N/A 1.782±0.18
ENSMUST00000184164 N/A N/A N/A N/A N/A N/A 0.088±0.02 N/A N/A N/A 0.024±0.00 N/A 0.007±0.00 0.041±0.00
ENSMUST00000185249 0.507±0.11 N/A 0.810±0.03 0.040±0.01 1.120±0.44 13.003±1.00 0.175±0.09 15.117±1.18 12.436±6.94 2.832±0.17 N/A 0.675±0.18 3.718±3.17 0.248±0.14
ENSMUSG00000035949 ENSMUST00000028220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.737±0.56 N/A N/A N/A
ENSMUST00000091020 10.239±2.12 5.814±1.31 9.430±1.33 12.523±4.11 10.157±3.66 6.613±2.18 3.055±0.67 4.020±0.74 7.312±3.75 10.112±2.34 9.734±1.72 10.500±4.18 6.983±1.48 2.176±0.37
ENSMUST00000113075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.578±0.00 0.468±0.00
ENSMUST00000113077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113078 8.454±0.32 N/A N/A N/A 3.363±0.00 4.695±0.00 N/A N/A 5.551±0.13 11.109±0.70 N/A 8.196±1.48 7.232±0.83 N/A
ENSMUST00000113080 19.891±2.71 12.257±1.82 16.541±0.57 7.580±0.17 9.391±3.85 9.723±1.93 10.603±2.18 9.148±1.35 8.181±1.98 23.495±2.52 9.251±3.26 9.012±2.78 8.323±0.92 4.319±1.09
ENSMUST00000126051 N/A 18.517±2.86 N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.131±1.46 N/A N/A
ENSMUST00000131534 N/A N/A 6.998±0.65 8.174±0.00 5.543±0.96 N/A 2.934±0.49 3.600±0.49 8.537±2.73 N/A 2.820±0.00 4.804±0.36 5.592±0.31 1.944±0.03
ENSMUST00000134323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145660 N/A 15.137±3.98 N/A 27.003±0.00 N/A N/A N/A N/A N/A N/A N/A 10.526±4.45 16.791±2.93 2.608±0.00
ENSMUST00000150865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156130 N/A N/A N/A N/A N/A 3.429±0.00 N/A 3.175±0.00 N/A N/A N/A 5.704±0.78 N/A N/A
ENSMUSG00000081904 ENSMUST00000121711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.256±0.00 N/A

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