C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028225 Psmd5-001 ENSMUSG00000026869 10090 - 2:34852088-34870939 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028225
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028225 18.950±1.32 25.474±3.14 20.797±3.41 17.487±9.89 16.441±2.25 13.472±0.84 5.452±0.42 16.708±2.55 21.669±12.32 14.017±1.44 5.967±0.36 19.883±4.08 18.325±8.98 4.161±1.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FI CIL_0004FI_0002 CGP 2:34804514-34874968

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006457 IEA protein folding
GO:0008540 IEA proteasome regulatory particle, base subcomplex
GO:0022624 IDA proteasome accessory complex
GO:0044183 IEA protein binding involved in protein folding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000210313 PSMD5-001 protein_coding Homo_sapiens 0 1779
ENST00000373904 PSMD5-007 protein_coding Homo_sapiens 0 1140
ENST00000496688 PSMD5-005 retained_intron Homo_sapiens 0 204

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