C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004GU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000172478-ENSG00000226321 CGP 9606 2:240886048-240993311
GeneTranscriptPositionBiotype
ENSG00000172478 (C2orf54)
chromosome 2 open reading frame 54
ENST00000307486 (C2orf54-003) 240886049-240892038 protein_coding
ENST00000388934 (C2orf54-001) 240886662-240896156 protein_coding
ENST00000402775 (C2orf54-004) 240886048-240892035 protein_coding
ENST00000414499 (C2orf54-005) 240895600-240896889 protein_coding
ENST00000454476 (C2orf54-006) 240895643-240896852 protein_coding
ENSG00000223991 (AC104809.2)
ENST00000425110 (AC104809.2-001) 240981515-240986072 antisense
ENSG00000226321 (AC104809.3)
Protein LOC728763 {ECO:0000313|Ensembl:ENSP00000397968}
ENST00000443866 (AC104809.3-006) 240906330-240993311 protein_coding
ENST00000477311 (AC104809.3-007) 240932519-240933317 retained_intron
ENST00000480779 (AC104809.3-004) 240949655-240950929 retained_intron
ENSG00000233392 (AC104809.4)
ENST00000418218 (AC104809.4-002) 240954617-240967451 antisense
ENST00000438506 (AC104809.4-003) 240959096-240959800 retained_intron
ENST00000457369 (AC104809.4-001) 240955024-240959354 antisense
CIL_0004GU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034159-ENSMUSG00000084989 CGP 10090 1:93151349-93231072
GeneTranscriptPositionBiotype
ENSMUSG00000034159 (2310007B03Rik)
RIKEN cDNA 2310007B03 gene
ENSMUST00000043718 (2310007B03Rik-001) 93151349-93160948 protein_coding
ENSMUST00000143419 (2310007B03Rik-002) 93151583-93160870 protein_coding
ENSMUSG00000084989 (E030010N08Rik)
RIKEN cDNA E030010N08 gene
ENSMUST00000138595 (E030010N08Rik-001) 93215899-93231072 protein_coding
ENSMUST00000188817 (E030010N08Rik-002) 93194049-93198641 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GU_0001ENSG00000172478ENST00000307486ENST00000388934ENST00000402775ENST00000414499ENST00000454476ENSG00000223991ENST00000425110ENSG00000226321ENST00000443866ENST00000477311ENST00000480779ENSG00000233392ENST00000418218ENST00000438506ENST00000457369CIL_0004GU_0002ENSMUSG00000034159ENSMUST00000043718ENSMUST00000143419ENSMUSG00000084989ENSMUST00000138595ENSMUST00000188817
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GU_0001ENSG00000172478ENST00000307486ENST00000388934ENST00000402775ENST00000414499ENSG00000223991ENST00000425110ENSG00000226321ENST00000443866ENST00000480779ENSG00000233392ENST00000418218ENST00000438506ENST00000457369CIL_0004GU_0002ENSMUSG00000034159ENSMUST00000043718ENSMUST00000143419ENSMUSG00000084989ENSMUST00000138595ENSMUST00000188817
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172478 ENST00000307486 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000388934 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A 0.254±0.00 N/A N/A 2.624±3.29 0.530±0.17 N/A
ENST00000402775 N/A 0.089±0.00 0.562±0.00 0.046±0.02 0.108±0.00 0.064±0.00 0.010±0.00 1.089±0.89 0.140±0.00 0.483±0.03 N/A 1.101±0.00 0.361±0.25 0.105±0.00
ENST00000414499 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.755±0.00 N/A N/A N/A N/A
ENST00000454476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223991 ENST00000425110 N/A N/A N/A 0.035±0.00 N/A N/A N/A 0.623±0.00 2.901±0.00 0.274±0.00 N/A 1.021±0.00 N/A 0.187±0.04
ENSG00000226321 ENST00000443866 N/A 0.048±0.00 N/A 0.042±0.00 0.015±0.00 0.032±0.00 0.020±0.00 N/A N/A 0.508±0.00 N/A 0.119±0.00 N/A 0.085±0.03
ENST00000477311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480779 N/A N/A N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233392 ENST00000418218 N/A N/A N/A 0.062±0.00 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A
ENST00000438506 N/A N/A N/A N/A N/A 0.795±0.00 N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A
ENST00000457369 0.062±0.00 N/A N/A 0.209±0.11 N/A N/A 0.032±0.00 N/A N/A N/A N/A 0.715±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034159 ENSMUST00000043718 1.919±0.00 N/A 0.021±0.02 0.088±0.00 0.269±0.09 2.169±1.14 N/A 1.578±0.33 0.176±0.13 7.319±1.61 0.083±0.00 0.723±0.40 0.159±0.17 N/A
ENSMUST00000143419 0.638±0.65 N/A 0.019±0.00 0.163±0.04 0.085±0.02 3.994±0.90 0.314±0.01 2.116±0.83 0.157±0.11 25.674±3.30 0.022±0.01 1.200±0.65 0.042±0.02 0.035±0.02
ENSMUSG00000084989 ENSMUST00000138595 0.069±0.02 0.016±0.00 N/A 0.177±0.00 0.152±0.11 0.030±0.02 0.093±0.06 0.019±0.01 0.008±0.01 0.802±0.00 0.022±0.00 1.684±0.93 0.037±0.03 0.091±0.03
ENSMUST00000188817 0.524±0.29 N/A 0.170±0.05 0.804±0.00 0.267±0.01 N/A N/A 0.094±0.00 0.024±0.00 1.391±0.00 N/A 1.801±0.93 0.158±0.00 0.100±0.01

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