C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 2 open reading frame 54
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000172478 C2orf54 9606 - 2:240886048-240896889 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307486 C2orf54-003 240886049-240892038 protein_coding
  ENST00000388934 C2orf54-001 240886662-240896156 protein_coding
  ENST00000402775 C2orf54-004 240886048-240892035 protein_coding
  ENST00000414499 C2orf54-005 240895600-240896889 protein_coding
  ENST00000454476 C2orf54-006 240895643-240896852 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000307486ENST00000388934ENST00000402775ENST00000414499
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000307486 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000388934 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A 0.254±0.00 N/A 2.624±3.29 0.530±0.17 N/A
ENST00000402775 N/A 0.089±0.00 0.562±0.00 0.046±0.02 0.108±0.00 0.064±0.00 0.010±0.00 1.089±0.89 0.140±0.00 0.483±0.03 1.101±0.00 0.361±0.25 0.105±0.00
ENST00000414499 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.755±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LC CIL_0003LC_0001 CGP 2:240868479-240896889
CIL_0004GU CIL_0004GU_0001 CGP 2:240886048-240993311

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000034159 2310007B03Rik RIKEN cDNA 2310007B03 gene protein_coding Mus_musculus

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