C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004JH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000053575-ENSDARG00000020169 CGP 7955 8:42981607-43275912
GeneTranscriptPositionBiotype
ENSDARG00000020169 (fahd2a)
fumarylacetoacetate hydrolase domain containing 2A 		ENSDART00000017576 (fahd2a-201) 43206073-43275912 protein_coding
ENSDARG00000053575 (gpat2)
glycerol-3-phosphate acyltransferase 2, mitochondrial 		ENSDART00000075620 (gpat2-201) 42981607-43193410 protein_coding
ENSDART00000123288 (gpat2-002) 43068542-43163390 protein_coding
ENSDART00000129344 (gpat2-202) 43057582-43193410 protein_coding
ENSDART00000141349 (gpat2-001) 43055271-43193410 protein_coding
ENSDARG00000086217 (zgc:152830)
Uncharacterized protein 		ENSDART00000131135 (zgc:152830-201) 43267400-43275042 protein_coding
ENSDART00000155273 (zgc:152830-001) 43267403-43273541 protein_coding
ENSDARG00000097844 (si:ch1073-488c15.2)
si:ch1073-488c15.2 		ENSDART00000155209 (si:ch1073-488c15.2-001) 43243378-43256073 unprocessed_pseudogene

Danio rerio Ensembl (Zv9)

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CIL_0004JH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046338-ENSMUSG00000027371 CGP 10090 2:127425199-127444565
GeneTranscriptPositionBiotype
ENSMUSG00000027371 (Fahd2a)
fumarylacetoacetate hydrolase domain containing 2A 		ENSMUST00000028848 (Fahd2a-001) 127436215-127444550 protein_coding
ENSMUST00000123327 (Fahd2a-003) 127436271-127438319 processed_transcript
ENSMUST00000137366 (Fahd2a-004) 127436837-127444557 processed_transcript
ENSMUST00000137502 (Fahd2a-007) 127440431-127444508 processed_transcript
ENSMUST00000146437 (Fahd2a-006) 127438122-127444480 processed_transcript
ENSMUST00000146615 (Fahd2a-005) 127438411-127444516 retained_intron
ENSMUST00000146757 (Fahd2a-002) 127436216-127444565 retained_intron
ENSMUSG00000046338 (Gpat2)
glycerol-3-phosphate acyltransferase 2, mitochondrial 		ENSMUST00000062211 (Gpat2-001) 127425199-127436092 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JH_0001ENSDARG00000020169ENSDART00000017576ENSDARG00000053575ENSDART00000075620ENSDART00000123288ENSDART00000129344ENSDART00000141349ENSDARG00000086217ENSDART00000131135ENSDART00000155273ENSDARG00000097844ENSDART00000155209CIL_0004JH_0002ENSMUSG00000027371ENSMUST00000028848ENSMUST00000123327ENSMUST00000137366ENSMUST00000137502ENSMUST00000146437ENSMUST00000146615ENSMUST00000146757ENSMUSG00000046338ENSMUST00000062211
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004JH_0001ENSDARG00000020169ENSDART00000017576ENSDARG00000053575ENSDART00000075620ENSDART00000123288ENSDART00000141349ENSDARG00000086217ENSDART00000131135ENSDART00000155273ENSDARG00000097844ENSDART00000155209CIL_0004JH_0002ENSMUSG00000027371ENSMUST00000028848ENSMUST00000123327ENSMUST00000137366ENSMUST00000137502ENSMUST00000146437ENSMUST00000146757ENSMUSG00000046338ENSMUST00000062211
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000020169 ENSDART00000017576 N/A N/A N/A 3.323±0.73 N/A N/A 16.525±7.46 17.557±7.99 N/A N/A N/A N/A N/A N/A
ENSDARG00000053575 ENSDART00000075620 N/A N/A N/A 0.268±0.14 N/A N/A 0.201±0.00 2.069±0.00 0.333±0.00 N/A N/A N/A N/A N/A
ENSDART00000123288 N/A N/A N/A 0.222±0.00 N/A N/A 2.031±0.00 N/A N/A N/A 0.029±0.00 N/A N/A N/A
ENSDART00000129344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141349 N/A N/A N/A 0.096±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000086217 ENSDART00000131135 N/A N/A N/A 22.571±11.55 N/A N/A 25.127±13.27 15.198±0.00 0.558±0.00 N/A 4.958±0.00 N/A N/A N/A
ENSDART00000155273 N/A N/A N/A 1.763±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097844 ENSDART00000155209 N/A N/A N/A 4.750±0.28 N/A N/A 0.729±0.64 2.184±0.00 0.835±0.00 N/A 2.614±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027371 ENSMUST00000028848 9.689±2.95 21.545±3.41 7.346±0.30 2.788±0.45 7.971±3.06 4.558±1.93 13.701±1.51 31.712±2.99 8.043±4.67 4.420±1.08 8.741±0.70 7.865±2.93 1.439±0.71 8.052±3.97
ENSMUST00000123327 N/A N/A N/A 1.793±0.00 14.474±0.00 N/A N/A N/A N/A N/A N/A 7.301±1.10 1.967±0.63 N/A
ENSMUST00000137366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.273±0.00 N/A
ENSMUST00000137502 N/A 22.384±5.62 N/A 4.196±0.00 N/A N/A N/A N/A N/A N/A N/A 10.595±0.00 N/A N/A
ENSMUST00000146437 N/A N/A N/A 6.989±0.00 N/A N/A N/A N/A N/A N/A N/A 16.216±2.54 3.055±1.28 9.584±0.00
ENSMUST00000146615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146757 3.763±1.06 3.304±0.29 6.607±0.00 3.554±2.54 2.128±0.54 1.978±0.88 1.638±0.36 4.620±0.73 1.864±0.52 1.848±1.13 1.360±0.27 2.916±1.28 1.067±0.35 3.619±0.55
ENSMUSG00000046338 ENSMUST00000062211 0.123±0.03 0.124±0.01 N/A 0.077±0.02 0.072±0.03 0.086±0.03 0.035±0.01 0.687±0.23 0.387±0.22 0.114±0.01 0.040±0.01 0.541±0.43 1.061±0.47 21.927±1.50

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