C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerol-3-phosphate acyltransferase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062211 Gpat2-001 ENSMUSG00000046338 10090 + 2:127425199-127436092 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062211
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062211 0.123±0.03 0.124±0.01 0.077±0.02 0.072±0.03 0.086±0.03 0.035±0.01 0.687±0.23 0.387±0.22 0.114±0.01 0.040±0.01 0.541±0.43 1.061±0.47 21.927±1.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JH CIL_0004JH_0002 CGP 2:127425199-127444565

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004366 IDA glycerol-3-phosphate O-acyltransferase activity
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0006072 IDA glycerol-3-phosphate metabolic process
GO:0016021 IEA integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process
GO:0019432 IDA triglyceride biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359548 GPAT2-005 protein_coding Homo_sapiens 0 2060
ENST00000434632 GPAT2-001 protein_coding Homo_sapiens 0 2060
ENST00000439254 GPAT2-009 protein_coding Homo_sapiens 0 497
ENST00000444924 AC008268.2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 1317
ENST00000445404 AC018892.9-001 unprocessed_pseudogene Homo_sapiens 0 311
ENST00000453542 GPAT2-003 protein_coding Homo_sapiens 0 1138
ENST00000468438 GPAT2-010 processed_transcript Homo_sapiens 0 257
ENST00000471661 AC008268.2-002 retained_intron Homo_sapiens 0 617
ENST00000471757 GPAT2-002 retained_intron Homo_sapiens 0 976
ENST00000482704 GPAT2-007 retained_intron Homo_sapiens 0 538
ENST00000484440 GPAT2-004 retained_intron Homo_sapiens 0 1849
ENST00000486463 GPAT2-006 retained_intron Homo_sapiens 0 1550
ENST00000512705 AC009238.6-001 unprocessed_pseudogene Homo_sapiens 0 206

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