C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004KD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153487-ENSG00000088448 CGP 9606 13:110712736-110915069
GeneTranscriptPositionBiotype
ENSG00000088448 (ANKRD10)
ankyrin repeat domain 10 		ENST00000267339 (ANKRD10-003) 110878540-110915069 protein_coding
ENST00000310847 (ANKRD10-004) 110892692-110915006 protein_coding
ENST00000460846 (ANKRD10-010) 110905023-110914803 processed_transcript
ENST00000463156 (ANKRD10-001) 110904031-110906115 processed_transcript
ENST00000464579 (ANKRD10-009) 110903475-110906095 processed_transcript
ENST00000465753 (ANKRD10-006) 110892957-110915037 nonsense_mediated_decay
ENST00000475809 (ANKRD10-007) 110893028-110900739 processed_transcript
ENST00000485844 (ANKRD10-002) 110879768-110893082 processed_transcript
ENST00000489973 (ANKRD10-005) 110883709-110910746 processed_transcript
ENST00000494859 (ANKRD10-008) 110893197-110914617 processed_transcript
ENST00000603993 (ANKRD10-011) 110883195-110893132 protein_coding
ENSG00000134905 (CARS2)
cysteinyl-tRNA synthetase 2, mitochondrial (putative) 		ENST00000257347 (CARS2-001) 110641417-110706157 protein_coding
ENST00000375781 (CARS2-011) 110641417-110663775 retained_intron
ENST00000465145 (CARS2-007) 110667436-110706469 processed_transcript
ENST00000471986 (CARS2-006) 110642387-110646073 processed_transcript
ENST00000480437 (CARS2-005) 110642447-110646278 processed_transcript
ENST00000481787 (CARS2-009) 110641443-110683139 retained_intron
ENST00000485188 (CARS2-008) 110705521-110713535 processed_transcript
ENST00000487253 (CARS2-030) 110641587-110663518 nonsense_mediated_decay
ENST00000535398 (CARS2-014) 110643956-110713603 processed_transcript
ENST00000535516 (CARS2-012) 110641419-110663530 retained_intron
ENST00000535615 (CARS2-028) 110642511-110665730 retained_intron
ENST00000537386 (CARS2-025) 110646679-110663628 retained_intron
ENST00000537394 (CARS2-020) 110687732-110706133 nonsense_mediated_decay
ENST00000537404 (CARS2-029) 110646861-110651207 retained_intron
ENST00000537412 (CARS2-015) 110701502-110713601 processed_transcript
ENST00000537743 (CARS2-033) 110662838-110677024 protein_coding
ENST00000537802 (CARS2-003) 110641419-110665750 retained_intron
ENST00000539269 (CARS2-021) 110676974-110706053 nonsense_mediated_decay
ENST00000539405 (CARS2-026) 110650247-110667458 retained_intron
ENST00000540006 (CARS2-010) 110641412-110663861 retained_intron
ENST00000540215 (CARS2-031) 110644387-110646376 retained_intron
ENST00000540629 (CARS2-018) 110687792-110712486 processed_transcript
ENST00000540785 (CARS2-023) 110701351-110705616 retained_intron
ENST00000541239 (CARS2-013) 110641412-110645633 retained_intron
ENST00000541362 (CARS2-027) 110646467-110665737 retained_intron
ENST00000541443 (CARS2-019) 110677096-110706505 processed_transcript
ENST00000542126 (CARS2-017) 110687721-110713522 processed_transcript
ENST00000542709 (CARS2-022) 110687722-110705797 protein_coding
ENST00000542774 (CARS2-002) 110641584-110644681 processed_transcript
ENST00000543487 (CARS2-034) 110645930-110678093 processed_transcript
ENST00000544488 (CARS2-016) 110676999-110713522 processed_transcript
ENST00000545506 (CARS2-024) 110646851-110665791 retained_intron
ENST00000620794 (CARS2-035) 110643753-110647115 protein_coding
ENSG00000153487 (ING1)
inhibitor of growth family, member 1 		ENST00000333219 (ING1-001) 110713278-110723339 protein_coding
ENST00000338450 (ING1-003) 110712736-110720175 protein_coding
ENST00000375774 (ING1-004) 110714982-110721071 protein_coding
ENST00000375775 (ING1-002) 110713460-110720175 protein_coding
ENST00000464141 (ING1-005) 110715437-110719476 protein_coding
ENSG00000225239 (RPL21P107)
ribosomal protein L21 pseudogene 107 		ENST00000411449 (RPL21P107-001) 110762674-110763133 processed_pseudogene
ENSG00000229152 (ANKRD10-IT1)
ANKRD10 intronic transcript 1 (non-protein coding) 		ENST00000426991 (ANKRD10-IT1-001) 110894639-110899172 sense_intronic
ENSG00000255874 (LINC00346)
long intergenic non-protein coding RNA 346 		ENST00000538077 (LINC00346-001) 110863987-110870251 lincRNA
ENSG00000259831 (LINC00567)
long intergenic non-protein coding RNA 567 		ENST00000569854 (LINC00567-001) 110809676-110813084 lincRNA

Homo sapiens Ensembl (GRCh38)

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Transcripts
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CIL_0004KD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045969-ENSMUSG00000031508 CGP 10090 8:11556066-11635754
GeneTranscriptPositionBiotype
ENSMUSG00000031508 (Ankrd10)
ankyrin repeat domain 10 		ENSMUST00000033905 (Ankrd10-201) 11611583-11635754 protein_coding
ENSMUST00000169782 (Ankrd10-202) 11614151-11635754 protein_coding
ENSMUSG00000045969 (Ing1)
inhibitor of growth family, member 1 		ENSMUST00000054399 (Ing1-201) 11556066-11563250 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KD_0001ENSG00000088448ENST00000267339ENST00000310847ENST00000460846ENST00000463156ENST00000464579ENST00000465753ENST00000475809ENST00000485844ENST00000489973ENST00000494859ENST00000603993ENSG00000134905ENST00000257347ENST00000375781ENST00000465145ENST00000471986ENST00000480437ENST00000481787ENST00000485188ENST00000487253ENST00000535398ENST00000535516ENST00000535615ENST00000537386ENST00000537394ENST00000537404ENST00000537412ENST00000537743ENST00000537802ENST00000539269ENST00000539405ENST00000540006ENST00000540215ENST00000540629ENST00000540785ENST00000541239ENST00000541362ENST00000541443ENST00000542126ENST00000542709ENST00000542774ENST00000543487ENST00000544488ENST00000545506ENST00000620794ENSG00000153487ENST00000333219ENST00000338450ENST00000375774ENST00000375775ENST00000464141ENSG00000225239ENST00000411449ENSG00000229152ENST00000426991ENSG00000255874ENST00000538077ENSG00000259831ENST00000569854CIL_0004KD_0002ENSMUSG00000031508ENSMUST00000033905ENSMUST00000169782ENSMUSG00000045969ENSMUST00000054399
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KD_0001ENSG00000088448ENST00000267339ENST00000310847ENST00000489973ENSG00000134905ENST00000257347ENST00000375781ENST00000481787ENST00000537802ENST00000541239ENSG00000153487ENST00000333219ENST00000338450ENST00000375774ENST00000375775ENSG00000225239ENST00000411449ENSG00000229152ENST00000426991ENSG00000255874ENST00000538077ENSG00000259831ENST00000569854CIL_0004KD_0002ENSMUSG00000031508ENSMUST00000033905ENSMUST00000169782ENSMUSG00000045969ENSMUST00000054399
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088448 ENST00000267339 7.046±0.00 7.467±0.00 N/A N/A 7.253±0.00 9.569±2.77 7.522±0.00 13.322±0.00 3.379±0.00 14.165±0.00 15.616±13.30 14.381±0.00 4.288±0.47 7.786±0.00
ENST00000310847 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.634±0.00 2.440±0.00 22.183±0.00 4.704±0.42 22.455±13.79
ENST00000460846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.177±0.00 N/A
ENST00000494859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000603993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000134905 ENST00000257347 8.101±0.00 14.583±0.00 1.242±0.00 2.979±1.53 11.149±5.89 9.095±5.34 7.145±5.72 11.014±0.00 7.059±2.02 8.017±0.00 8.627±3.12 15.157±5.08 10.792±1.51 18.552±0.00
ENST00000375781 N/A N/A 0.992±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481787 N/A N/A 4.455±0.00 2.558±0.00 N/A N/A 1.374±0.00 5.146±2.25 5.641±0.00 4.282±0.00 4.072±0.00 20.747±6.31 10.295±3.67 27.510±0.00
ENST00000485188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.221±0.00 N/A N/A
ENST00000539269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541239 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.366±0.00 N/A N/A N/A N/A
ENST00000541362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153487 ENST00000333219 1.241±0.00 2.262±0.00 N/A 0.826±0.24 1.419±0.19 1.085±0.36 0.403±0.00 1.038±0.00 0.836±0.13 2.266±0.00 0.789±0.00 1.980±0.26 1.441±0.32 1.949±0.00
ENST00000338450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.926±0.00
ENST00000375774 2.892±0.00 5.516±0.00 N/A 4.168±0.00 3.339±0.00 3.033±0.00 2.246±0.00 2.607±0.43 2.036±0.10 2.746±1.44 1.965±0.00 6.501±1.24 3.272±0.37 5.363±0.00
ENST00000375775 6.383±0.00 N/A N/A 5.646±4.24 N/A 8.027±0.00 N/A N/A N/A 13.145±0.00 N/A 19.330±5.04 10.454±1.50 N/A
ENST00000464141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225239 ENST00000411449 N/A 0.096±0.00 N/A 0.364±0.00 0.032±0.00 0.119±0.00 0.030±0.00 N/A N/A N/A N/A 0.053±0.00 N/A 0.137±0.08
ENSG00000229152 ENST00000426991 1.870±0.00 N/A N/A 2.597±0.00 N/A 1.948±0.00 1.812±0.35 3.375±0.00 0.623±0.00 3.347±0.00 1.253±0.07 5.185±0.00 0.278±0.13 N/A
ENSG00000255874 ENST00000538077 0.460±0.00 0.403±0.00 0.103±0.00 0.182±0.15 0.633±0.43 0.169±0.11 0.113±0.11 0.462±0.00 0.049±0.01 0.347±0.00 2.953±0.99 0.805±0.50 0.903±0.71 0.974±0.35
ENSG00000259831 ENST00000569854 0.026±0.00 0.012±0.00 N/A 0.065±0.01 0.004±0.00 0.015±0.00 N/A 0.004±0.00 N/A N/A N/A 0.024±0.02 0.029±0.00 5.980±3.18
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031508 ENSMUST00000033905 27.850±18.01 32.753±16.80 22.161±2.70 34.760±25.64 31.017±10.35 48.008±13.28 8.834±2.57 11.875±4.68 10.279±7.84 22.892±5.68 3.930±1.01 76.632±31.16 9.938±4.11 10.391±6.58
ENSMUST00000169782 2.185±0.00 N/A N/A N/A 2.815±0.00 N/A N/A N/A 0.716±0.03 3.413±0.00 N/A N/A N/A 0.894±0.00
ENSMUSG00000045969 ENSMUST00000054399 3.734±1.23 4.433±0.92 8.931±1.96 15.864±7.70 3.796±1.64 5.476±1.61 2.277±1.20 3.445±1.65 4.323±3.23 6.398±3.26 3.014±1.18 6.870±2.09 9.370±4.40 16.405±7.51

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