C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004N4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088708-ENSDARG00000070694 CGP 7955 3:20046241-20350987
GeneTranscriptPositionBiotype
ENSDARG00000070694 (NXPH3)
neurexophilin 3
ENSDART00000104065 (NXPH3-001) 20294197-20350987 protein_coding
ENSDARG00000088708 (NGFR (2 of 3))
nerve growth factor receptor
ENSDART00000125281 (NGFR (2 of 3)-001) 20046241-20121066 protein_coding
CIL_0004N4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064300-ENSG00000182575 CGP 9606 17:49495293-49583827
GeneTranscriptPositionBiotype
ENSG00000064300 (NGFR)
nerve growth factor receptor
ENST00000172229 (NGFR-001) 49495293-49515017 protein_coding
ENST00000504201 (NGFR-002) 49497391-49513372 protein_coding
ENST00000509200 (NGFR-003) 49496624-49506385 protein_coding
ENSG00000182575 (NXPH3)
neurexophilin 3
ENST00000328741 (NXPH3-001) 49575858-49580358 protein_coding
ENST00000513748 (NXPH3-002) 49576122-49582290 protein_coding
ENST00000570453 (NXPH3-003) 49578634-49583827 retained_intron
ENSG00000249906 (RP5-1029K10.2)
ENST00000514506 (RP5-1029K10.2-001) 49505657-49574064 antisense
ENSG00000250310 (RP5-1029K10.4)
ENST00000503624 (RP5-1029K10.4-001) 49544847-49577962 antisense
ENSG00000252789 (AC006487.1)
ENST00000516980 (AC006487.1-201) 49561002-49561085 miRNA
ENSG00000277478 (MIR6165)
microRNA 6165
ENST00000614803 (MIR6165-201) 49510817-49510900 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004N4_0001ENSDARG00000070694ENSDART00000104065ENSDARG00000088708ENSDART00000125281CIL_0004N4_0002ENSG00000064300ENST00000172229ENST00000504201ENST00000509200ENSG00000182575ENST00000328741ENST00000513748ENST00000570453ENSG00000249906ENST00000514506ENSG00000250310ENST00000503624ENSG00000252789ENST00000516980ENSG00000277478ENST00000614803
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004N4_0001ENSDARG00000070694ENSDART00000104065ENSDARG00000088708ENSDART00000125281CIL_0004N4_0002ENSG00000064300ENST00000172229ENST00000504201ENSG00000182575ENST00000328741ENST00000513748ENST00000570453ENSG00000249906ENST00000514506ENSG00000250310ENST00000503624ENSG00000252789ENST00000516980ENSG00000277478ENST00000614803
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070694 ENSDART00000104065 N/A N/A N/A 0.738±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000088708 ENSDART00000125281 N/A N/A N/A 5.218±1.41 N/A N/A 1.121±0.33 0.297±0.07 0.020±0.00 N/A 0.326±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064300 ENST00000172229 9.017±0.00 47.067±0.00 0.209±0.00 0.966±0.84 4.729±3.29 5.667±5.60 3.077±2.66 4.459±2.28 3.236±2.02 2.095±1.62 0.721±0.00 2.906±3.03 25.943±4.10 4.321±0.00
ENST00000504201 N/A N/A 0.217±0.00 0.063±0.00 N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A
ENST00000509200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182575 ENST00000328741 3.128±0.00 2.809±0.00 N/A 2.521±1.06 1.916±1.45 5.486±5.45 0.243±0.12 0.240±0.00 0.510±0.40 1.472±1.24 0.889±0.33 2.728±2.58 3.018±1.59 7.839±0.00
ENST00000513748 N/A N/A N/A N/A N/A 0.443±0.00 0.477±0.00 N/A N/A 0.166±0.00 0.354±0.00 N/A N/A N/A
ENST00000570453 0.837±0.00 0.926±0.00 0.096±0.00 3.776±0.00 0.791±0.00 1.701±1.68 0.383±0.00 0.126±0.00 0.272±0.24 0.443±0.40 0.056±0.00 0.872±0.79 0.374±0.11 1.879±1.20
ENSG00000249906 ENST00000514506 N/A N/A N/A N/A N/A 0.510±0.00 N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A
ENSG00000250310 ENST00000503624 N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 0.066±0.00 N/A
ENSG00000252789 ENST00000516980 0.950±0.00 1.560±0.00 N/A N/A N/A N/A 4.000±0.00 0.306±0.00 N/A 0.311±0.00 N/A N/A N/A N/A
ENSG00000277478 ENST00000614803 N/A 0.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading