C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004OO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052376-ENSDARG00000031203 CGP 7955 1:54029576-54059105
GeneTranscriptPositionBiotype
ENSDARG00000031203 (commd1)
copper metabolism (Murr1) domain containing 1 		ENSDART00000100788 (commd1-001) 54045655-54059105 protein_coding
ENSDART00000136115 (commd1-002) 54058152-54059094 processed_transcript
ENSDARG00000052376 (b3gnt2a)
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2a 		ENSDART00000074221 (b3gnt2a-001) 54029576-54031260 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004OO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051650-ENSMUSG00000051355 CGP 10090 11:22834747-22982382
GeneTranscriptPositionBiotype
ENSMUSG00000044068 (Zrsr1)
zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 		ENSMUST00000049506 (Zrsr1-001) 22973215-22976496 protein_coding
ENSMUSG00000051650 (B3gnt2)
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 		ENSMUST00000055549 (B3gnt2-002) 22834865-22860488 protein_coding
ENSMUST00000062844 (B3gnt2-001) 22834747-22860101 protein_coding
ENSMUST00000173660 (B3gnt2-003) 22836583-22860961 protein_coding
ENSMUSG00000092455 (Gm20456)
predicted gene 20456 		ENSMUST00000174690 (Gm20456-001) 22839299-22842604 processed_transcript
ENSMUSG00000098650 (Gm28048)
predicted gene, 28048 		ENSMUST00000160826 (Gm28048-001) 22834744-22982090 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004OO_0001ENSDARG00000031203ENSDART00000100788ENSDART00000136115ENSDARG00000052376ENSDART00000074221CIL_0004OO_0002ENSMUSG00000044068ENSMUST00000049506ENSMUSG00000051650ENSMUST00000055549ENSMUST00000062844ENSMUST00000173660ENSMUSG00000092455ENSMUST00000174690ENSMUSG00000098650ENSMUST00000160826
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004OO_0001ENSDARG00000031203ENSDART00000100788ENSDART00000136115ENSDARG00000052376ENSDART00000074221CIL_0004OO_0002ENSMUSG00000044068ENSMUST00000049506ENSMUSG00000051650ENSMUST00000055549ENSMUST00000062844ENSMUSG00000092455ENSMUST00000174690ENSMUSG00000098650ENSMUST00000160826
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031203 ENSDART00000100788 N/A N/A N/A 6.362±6.04 N/A N/A 36.263±0.00 12.115±0.00 2.081±0.00 N/A 8.137±0.00 N/A N/A N/A
ENSDART00000136115 N/A N/A N/A N/A N/A N/A 0.951±0.00 0.617±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000052376 ENSDART00000074221 N/A N/A N/A 0.149±0.04 N/A N/A 0.559±0.34 0.345±0.25 N/A N/A 0.260±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044068 ENSMUST00000049506 1.930±0.18 N/A 5.311±0.00 2.001±0.00 2.375±0.00 N/A 1.832±0.00 N/A 6.762±1.82 4.269±0.00 3.355±0.07 8.774±1.23 4.649±0.99 5.595±0.00
ENSMUSG00000051650 ENSMUST00000055549 2.928±1.26 N/A 7.384±0.89 N/A 7.160±0.00 N/A 2.453±0.32 N/A 3.402±0.00 4.900±0.00 N/A N/A N/A N/A
ENSMUST00000062844 8.179±3.62 40.465±9.61 9.349±2.75 N/A 8.637±2.50 26.378±3.18 3.741±0.57 14.932±1.87 5.079±1.11 13.373±2.42 N/A 12.214±2.92 6.109±2.11 N/A
ENSMUST00000173660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000092455 ENSMUST00000174690 0.502±0.18 1.008±0.30 0.578±0.14 0.307±0.09 0.392±0.17 0.887±0.29 0.155±0.00 0.621±0.38 0.311±0.15 0.287±0.00 N/A 0.587±0.44 0.432±0.19 N/A
ENSMUSG00000098650 ENSMUST00000160826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.986±0.00 N/A N/A

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