C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004RB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075025-ENSDARG00000074905 CGP 7955 4:7056388-7163167
GeneTranscriptPositionBiotype
ENSDARG00000074905 (camk1da)
calcium/calmodulin-dependent protein kinase 1Da 		ENSDART00000104676 (camk1da-201) 7068416-7163167 protein_coding
ENSDARG00000075025 (cdc123)
cell division cycle 123 homolog (S. cerevisiae) 		ENSDART00000111986 (cdc123-201) 7056388-7063840 protein_coding
CIL_0004RB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151465-ENSG00000183049 CGP 9606 10:12195965-12835545
GeneTranscriptPositionBiotype
ENSG00000151465 (CDC123)
cell division cycle 123 		ENST00000281141 (CDC123-001) 12195966-12250588 protein_coding
ENST00000378900 (CDC123-003) 12196223-12250359 protein_coding
ENST00000429258 (CDC123-007) 12195965-12230978 protein_coding
ENST00000440613 (CDC123-009) 12230948-12250589 protein_coding
ENST00000442050 (CDC123-002) 12196232-12237224 protein_coding
ENST00000455773 (CDC123-008) 12196130-12249706 processed_transcript
ENST00000467016 (CDC123-006) 12196196-12198876 retained_intron
ENST00000497963 (CDC123-005) 12246054-12250319 retained_intron
ENST00000498747 (CDC123-004) 12217414-12250529 processed_transcript
ENSG00000183049 (CAMK1D)
calcium/calmodulin-dependent protein kinase ID 		ENST00000378845 (CAMK1D-002) 12349733-12826143 protein_coding
ENST00000487696 (CAMK1D-003) 12349652-12666949 retained_intron
ENST00000615792 (CAMK1D-201) 12760576-12829736 protein_coding
ENST00000619168 (CAMK1D-001) 12349482-12835545 protein_coding
ENSG00000221331 (MIR548Q)
microRNA 548q 		ENST00000408404 (MIR548Q-201) 12725254-12725353 miRNA
ENSG00000228302 (RP11-186N15.3)
 ENST00000421657 (RP11-186N15.3-001) 12245628-12247845 antisense
ENST00000598961 (RP11-186N15.3-002) 12244751-12246158 antisense
ENSG00000252118 (RNU6ATAC39P)
RNA, U6atac small nuclear 39, pseudogene 		ENST00000516309 (RNU6ATAC39P-201) 12456483-12456631 snRNA
ENSG00000264036 (RN7SL198P)
RNA, 7SL, cytoplasmic 198, pseudogene 		ENST00000583190 (RN7SL198P-201) 12328132-12328389 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RB_0001ENSDARG00000074905ENSDART00000104676ENSDARG00000075025ENSDART00000111986CIL_0004RB_0002ENSG00000151465ENST00000281141ENST00000378900ENST00000429258ENST00000440613ENST00000442050ENST00000455773ENST00000467016ENST00000497963ENST00000498747ENSG00000183049ENST00000378845ENST00000487696ENST00000615792ENST00000619168ENSG00000221331ENST00000408404ENSG00000228302ENST00000421657ENST00000598961ENSG00000252118ENST00000516309ENSG00000264036ENST00000583190
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RB_0001ENSDARG00000074905ENSDART00000104676ENSDARG00000075025ENSDART00000111986CIL_0004RB_0002ENSG00000151465ENST00000281141ENST00000455773ENST00000498747ENSG00000183049ENST00000378845ENST00000615792ENST00000619168ENSG00000221331ENST00000408404ENSG00000228302ENST00000421657ENSG00000252118ENST00000516309ENSG00000264036ENST00000583190
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000074905 ENSDART00000104676 N/A N/A N/A N/A N/A N/A 0.145±0.07 1.135±0.08 0.030±0.00 N/A 0.275±0.00 N/A N/A N/A
ENSDARG00000075025 ENSDART00000111986 N/A N/A N/A 9.532±2.99 N/A N/A 3.968±2.79 2.791±2.58 0.678±0.00 N/A 5.711±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151465 ENST00000281141 N/A N/A N/A 12.847±0.00 N/A 9.701±0.00 6.987±5.59 21.159±0.00 13.862±0.00 9.787±0.00 7.005±0.00 79.310±0.00 11.471±4.19 N/A
ENST00000378900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455773 11.738±0.00 22.265±0.00 N/A 17.622±0.00 15.953±0.00 10.359±0.00 14.781±0.00 N/A N/A N/A 10.052±0.00 N/A N/A N/A
ENST00000467016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.762±0.00 N/A N/A N/A
ENSG00000183049 ENST00000378845 N/A N/A 0.317±0.00 N/A N/A N/A N/A N/A 1.570±0.00 1.877±0.00 N/A 4.012±0.00 N/A 1.504±0.00
ENST00000487696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615792 N/A N/A N/A N/A N/A 1.752±0.00 0.829±0.00 N/A N/A N/A N/A 9.083±0.00 0.479±0.00 4.430±0.00
ENST00000619168 0.787±0.00 1.324±0.00 0.042±0.00 6.487±2.18 1.018±0.33 1.618±0.00 0.252±0.10 1.781±0.00 2.643±1.38 1.564±0.19 0.157±0.13 2.954±1.36 0.396±0.04 3.071±0.00
ENSG00000221331 ENST00000408404 N/A N/A N/A N/A N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000228302 ENST00000421657 N/A N/A N/A N/A N/A N/A 6.111±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000598961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252118 ENST00000516309 N/A 0.510±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264036 ENST00000583190 0.066±0.00 0.491±0.00 N/A 0.308±0.00 0.218±0.00 N/A N/A N/A 0.063±0.00 N/A N/A 1.391±0.00 N/A 0.254±0.00

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