C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004RN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000008022-ENSDARG00000089236 CGP 7955 7:33311274-33476926
GeneTranscriptPositionBiotype
ENSDARG00000008022 (kif18a)
kinesin family member 18A 		ENSDART00000023568 (kif18a-001) 33311274-33355368 protein_coding
ENSDART00000134521 (kif18a-002) 33352428-33356363 protein_coding
ENSDARG00000083943 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000119343 (5S_rRNA.435-201) 33417681-33417797 rRNA
ENSDARG00000089236 (METTL15)
methyltransferase like 15 		ENSDART00000123463 (METTL15-201) 33356785-33476926 protein_coding
CIL_0004RN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000121621-ENSG00000169519 CGP 9606 11:28020620-28333507
GeneTranscriptPositionBiotype
ENSG00000121621 (KIF18A)
kinesin family member 18A 		ENST00000263181 (KIF18A-001) 28020620-28108308 protein_coding
ENST00000526288 (KIF18A-002) 28097332-28108145 retained_intron
ENST00000531047 (KIF18A-004) 28084274-28088580 retained_intron
ENST00000533466 (KIF18A-003) 28076482-28097887 retained_intron
ENSG00000169519 (METTL15)
methyltransferase like 15 		ENST00000303459 (METTL15-002) 28110312-28333507 protein_coding
ENST00000403099 (METTL15-006) 28108320-28125587 protein_coding
ENST00000406787 (METTL15-001) 28108248-28333507 protein_coding
ENST00000407364 (METTL15-003) 28108354-28333507 protein_coding
ENST00000437814 (METTL15-004) 28110315-28125866 nonsense_mediated_decay
ENST00000451385 (METTL15-005) 28108330-28332422 nonsense_mediated_decay
ENST00000468295 (METTL15-007) 28327581-28330629 retained_intron
ENSG00000222385 (RN7SKP158)
RNA, 7SK small nuclear pseudogene 158 		ENST00000410453 (RN7SKP158-201) 28261194-28261519 misc_RNA
ENSG00000238149 (AC104978.1)
 ENST00000449387 (AC104978.1-001) 28287235-28287625 processed_pseudogene
ENSG00000271332 (RP11-797J4.1)
 ENST00000605824 (RP11-797J4.1-001) 28144907-28145204 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RN_0001ENSDARG00000008022ENSDART00000023568ENSDART00000134521ENSDARG00000083943ENSDART00000119343ENSDARG00000089236ENSDART00000123463CIL_0004RN_0002ENSG00000121621ENST00000263181ENST00000526288ENST00000531047ENST00000533466ENSG00000169519ENST00000303459ENST00000403099ENST00000406787ENST00000407364ENST00000437814ENST00000451385ENST00000468295ENSG00000222385ENST00000410453ENSG00000238149ENST00000449387ENSG00000271332ENST00000605824
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RN_0001ENSDARG00000008022ENSDART00000023568ENSDARG00000083943ENSDART00000119343ENSDARG00000089236ENSDART00000123463CIL_0004RN_0002ENSG00000121621ENST00000263181ENSG00000169519ENST00000303459ENST00000406787ENST00000407364ENST00000451385ENSG00000222385ENST00000410453ENSG00000238149ENST00000449387ENSG00000271332ENST00000605824
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000008022 ENSDART00000023568 N/A N/A N/A 0.130±0.00 N/A N/A N/A 2.645±1.29 0.092±0.00 N/A 0.129±0.00 N/A N/A N/A
ENSDART00000134521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000083943 ENSDART00000119343 N/A N/A N/A N/A N/A N/A N/A 107.849±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000089236 ENSDART00000123463 N/A N/A N/A 0.986±0.66 N/A N/A 1.420±0.35 N/A 0.437±0.00 N/A 1.155±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000121621 ENST00000263181 N/A N/A N/A N/A 0.600±0.00 1.336±0.00 N/A N/A N/A 0.505±0.03 N/A 2.193±0.68 0.421±0.29 8.632±2.47
ENST00000526288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169519 ENST00000303459 N/A 0.551±0.00 N/A 0.515±0.00 0.816±0.14 0.632±0.00 0.616±0.00 N/A 0.693±0.00 N/A 0.395±0.02 1.052±0.41 0.406±0.00 N/A
ENST00000403099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406787 N/A N/A 1.136±0.00 1.516±0.00 N/A 1.436±0.15 0.230±0.00 2.620±0.00 1.407±0.00 2.368±0.00 N/A 0.823±0.26 0.769±0.10 1.310±0.00
ENST00000407364 1.321±0.00 0.697±0.00 0.725±0.00 0.753±0.00 0.461±0.00 1.122±0.00 1.182±0.34 1.035±0.42 N/A 1.184±0.00 0.993±0.00 1.027±0.44 0.471±0.14 N/A
ENST00000437814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451385 N/A N/A N/A N/A N/A N/A N/A N/A 0.963±0.00 N/A N/A N/A N/A N/A
ENST00000468295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222385 ENST00000410453 N/A N/A 0.298±0.00 N/A 3.674±0.00 0.429±0.00 0.922±0.00 N/A 2.638±0.00 1.376±0.00 N/A 0.234±0.00 N/A N/A
ENSG00000238149 ENST00000449387 0.037±0.00 N/A N/A N/A 0.229±0.00 0.246±0.00 N/A N/A 0.210±0.00 N/A N/A N/A N/A N/A
ENSG00000271332 ENST00000605824 N/A 0.252±0.00 N/A N/A N/A N/A 0.705±0.47 N/A N/A N/A N/A 0.124±0.00 N/A 0.126±0.00

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