C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 18A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263181 KIF18A-001 ENSG00000121621 9606 - 11:28020620-28108308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLungOvaryPlacentaTestisENST00000263181
Transcript ID Breast Colon Lung Ovary Placenta Testis
ENST00000263181 0.600±0.00 1.336±0.00 0.505±0.03 2.193±0.68 0.421±0.29 8.632±2.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004RP CIL_0004RP_0002 CGP 11:27654893-28108308
CIL_0004RN CIL_0004RN_0002 CGP 11:28020620-28333507

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0001726 IDA ruffle
GO:0003777 IEA microtubule motor activity
GO:0003779 IPI actin binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005828 IDA kinetochore microtubule
GO:0005829 TAS cytosol
GO:0005871 IBA kinesin complex
GO:0005901 IDA caveola
GO:0006200 IDA ATP catabolic process
GO:0007018 IBA:IEA microtubule-based movement
GO:0007019 IDA microtubule depolymerization
GO:0007080 IDA mitotic metaphase plate congression
GO:0007596 TAS blood coagulation
GO:0008017 IDA:IEA microtubule binding
GO:0008152 IDA metabolic process
GO:0008574 IDA plus-end-directed microtubule motor activity
GO:0015031 IEA protein transport
GO:0015630 IDA microtubule cytoskeleton
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0043130 IDA ubiquitin binding
GO:0051010 IDA microtubule plus-end binding
GO:0070463 IDA tubulin-dependent ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028527 Kif18a-001 protein_coding Mus_musculus 0 2165
ENSMUST00000144924 Kif18a-004 retained_intron Mus_musculus 0 1792
ENSMUST00000151395 Kif18a-003 retained_intron Mus_musculus 0 1679
ENSMUST00000130137 Kif18a-002 retained_intron Mus_musculus 0 946
ENSMUST00000162515 Kif18a-006 retained_intron Mus_musculus 0 475
ENSMUST00000152751 Kif18a-005 retained_intron Mus_musculus 0 250

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