C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004SY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000055901-ENSDARG00000086290 CGP 7955 16:29963111-30232440
GeneTranscriptPositionBiotype
ENSDARG00000055901 (steap4)
STEAP family member 4 		ENSDART00000129317 (steap4-201) 29963111-29976723 protein_coding
ENSDART00000145198 (steap4-001) 29963111-29977411 protein_coding
ENSDARG00000086290 (znf804b)
zinc finger protein 804B 		ENSDART00000127080 (znf804b-201) 30046870-30232440 protein_coding
ENSDART00000133696 (znf804b-001) 30186047-30227095 protein_coding
CIL_0004SY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000127954-ENSG00000182348 CGP 9606 7:88276429-89337057
GeneTranscriptPositionBiotype
ENSG00000127954 (STEAP4)
STEAP family member 4 		ENST00000301959 (STEAP4-002) 88278028-88306888 protein_coding
ENST00000380079 (STEAP4-001) 88276429-88306891 protein_coding
ENST00000414498 (STEAP4-003) 88281483-88306880 protein_coding
ENSG00000164645 (C7orf62)
chromosome 7 open reading frame 62 		ENST00000297203 (C7orf62-001) 88794106-88795721 protein_coding
ENSG00000182348 (ZNF804B)
zinc finger protein 804B 		ENST00000333190 (ZNF804B-001) 88759368-89337032 protein_coding
ENST00000611114 (ZNF804B-201) 89218154-89337057 protein_coding
ENSG00000225701 (EIF4A1P13)
eukaryotic translation initiation factor 4A1 pseudogene 13 		ENST00000415667 (EIF4A1P13-001) 88448788-88449017 processed_pseudogene
ENSG00000228928 (AC002069.5)
 ENST00000419546 (AC002069.5-001) 88564793-88566281 processed_pseudogene
ENSG00000231763 (PQLC1P1)
PQ loop repeat containing 1 pseudogene 1 		ENST00000434950 (PQLC1P1-001) 88610241-88610669 processed_pseudogene
ENSG00000233420 (AC002127.4)
 ENST00000444032 (AC002127.4-001) 88710631-88756725 lincRNA
ENSG00000235639 (AC002069.6)
 ENST00000429649 (AC002069.6-001) 88512029-88513187 processed_pseudogene
ENSG00000237709 (EEF1A1P28)
eukaryotic translation elongation factor 1 alpha 1 pseudogene 28 		ENST00000450915 (EEF1A1P28-001) 88639014-88640416 processed_pseudogene
ENSG00000270812 (CTA-326K9.1)
 ENST00000603580 (CTA-326K9.1-001) 88455309-88456191 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004SY_0001ENSDARG00000055901ENSDART00000129317ENSDART00000145198ENSDARG00000086290ENSDART00000127080ENSDART00000133696CIL_0004SY_0002ENSG00000127954ENST00000301959ENST00000380079ENST00000414498ENSG00000164645ENST00000297203ENSG00000182348ENST00000333190ENST00000611114ENSG00000225701ENST00000415667ENSG00000228928ENST00000419546ENSG00000231763ENST00000434950ENSG00000233420ENST00000444032ENSG00000235639ENST00000429649ENSG00000237709ENST00000450915ENSG00000270812ENST00000603580
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004SY_0001ENSDARG00000055901ENSDART00000129317ENSDART00000145198ENSDARG00000086290ENSDART00000127080CIL_0004SY_0002ENSG00000127954ENST00000301959ENST00000380079ENSG00000164645ENST00000297203ENSG00000182348ENST00000333190ENST00000611114ENSG00000225701ENST00000415667ENSG00000228928ENST00000419546ENSG00000231763ENST00000434950ENSG00000233420ENST00000444032ENSG00000235639ENST00000429649ENSG00000237709ENST00000450915ENSG00000270812ENST00000603580
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055901 ENSDART00000129317 N/A N/A N/A 0.577±0.05 N/A N/A 27.829±13.11 36.874±24.46 N/A N/A 3.299±0.00 N/A N/A N/A
ENSDART00000145198 N/A N/A N/A 1.922±0.44 N/A N/A 13.793±0.59 17.312±0.00 24.873±0.00 N/A 2.281±0.00 N/A N/A N/A
ENSDARG00000086290 ENSDART00000127080 N/A N/A N/A 1.682±0.00 N/A N/A 0.105±0.00 0.094±0.00 N/A N/A 0.298±0.00 N/A N/A N/A
ENSDART00000133696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127954 ENST00000301959 N/A N/A N/A N/A 8.172±0.00 N/A 1.478±0.00 1.519±0.00 3.006±0.00 5.296±0.00 0.845±0.00 0.854±0.12 1.523±0.00 N/A
ENST00000380079 101.629±0.00 51.970±0.00 N/A 0.635±0.54 9.501±4.15 14.388±12.62 4.618±3.62 1.414±0.55 5.438±1.61 6.816±0.23 4.049±0.00 1.974±0.89 3.333±1.99 8.469±5.03
ENST00000414498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164645 ENST00000297203 N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A 15.778±4.75
ENSG00000182348 ENST00000333190 N/A 0.015±0.00 0.357±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611114 N/A N/A 0.755±0.00 0.293±0.23 N/A 0.032±0.00 0.023±0.00 0.047±0.00 0.008±0.00 0.036±0.00 N/A 0.004±0.00 0.005±0.00 0.041±0.02
ENSG00000225701 ENST00000415667 N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228928 ENST00000419546 N/A N/A N/A 0.042±0.00 0.070±0.00 0.489±0.00 N/A 0.041±0.00 N/A N/A N/A N/A N/A 0.027±0.01
ENSG00000231763 ENST00000434950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.041±0.00 N/A N/A
ENSG00000233420 ENST00000444032 N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A 0.058±0.00 N/A N/A N/A 0.015±0.00
ENSG00000235639 ENST00000429649 N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237709 ENST00000450915 0.522±0.00 0.428±0.00 N/A 0.262±0.00 0.427±0.00 0.499±0.00 0.008±0.00 0.271±0.00 0.043±0.01 0.283±0.00 0.113±0.00 0.071±0.00 N/A 0.180±0.12
ENSG00000270812 ENST00000603580 N/A N/A N/A N/A N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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