Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	eukaryotic translation elongation factor 1 alpha 1 pseudogene 28
ENST00000450915	EEF1A1P28-001	ENSG00000237709	9606	+	7:88639014-88640416	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Testis
ENST00000450915	0.522±0.00	0.428±0.00	0.262±0.00	0.427±0.00	0.499±0.00	0.008±0.00	0.271±0.00	0.043±0.01	0.283±0.00	0.113±0.00	0.071±0.00	0.180±0.12

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0004SY	CIL_0004SY_0002	CGP	7:88276429-89337057

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000042235	Eef1a1-001	protein_coding	Mus_musculus	0	1310
ENSMUST00000187672	RP23-307G23.3-001	processed_pseudogene	Mus_musculus	0	1242
ENSMUST00000118928	Gm13456-001	processed_pseudogene	Mus_musculus	0	1221
ENSMUST00000118650	Gm6767-001	processed_pseudogene	Mus_musculus	0	1114
ENSMUST00000161562	Gm5822-001	processed_pseudogene	Mus_musculus	0	1038
ENSMUST00000167498	Gm6548-001	processed_pseudogene	Mus_musculus	0	1024
ENSMUST00000121596	Gm12912-001	processed_pseudogene	Mus_musculus	0	1007
ENSMUST00000144523	Eef1a1-005	retained_intron	Mus_musculus	0	780
ENSMUST00000154207	Eef1a1-008	protein_coding	Mus_musculus	0	752
ENSMUST00000126614	Eef1a1-006	retained_intron	Mus_musculus	0	651
ENSMUST00000156988	Eef1a1-003	protein_coding	Mus_musculus	0	564
ENSMUST00000150960	Eef1a1-002	retained_intron	Mus_musculus	0	497
ENSMUST00000143570	Eef1a1-007	processed_transcript	Mus_musculus	0	422
ENSMUST00000189923	RP23-478L14.1-001	processed_pseudogene	Mus_musculus	0	370
ENSMUST00000129380	Eef1a1-004	retained_intron	Mus_musculus	0	316

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