C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000450915 EEF1A1P28-001 ENSG00000237709 9606 + 7:88639014-88640416 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000450915
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000450915 0.522±0.00 0.428±0.00 0.262±0.00 0.427±0.00 0.499±0.00 0.008±0.00 0.271±0.00 0.043±0.01 0.283±0.00 0.113±0.00 0.071±0.00 0.180±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SY CIL_0004SY_0002 CGP 7:88276429-89337057

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1310
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1242
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1221
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1114
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1038
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1024
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1007
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 780
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 752
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 651
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 564
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 497
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 422
ENSMUST00000189923 RP23-478L14.1-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 316

Loading