C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004TC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000080031-ENSG00000180089 CGP 9606 19:55181248-55229264
GeneTranscriptPositionBiotype
ENSG00000080031 (PTPRH)
protein tyrosine phosphatase, receptor type, H
ENST00000263434 (PTPRH-002) 55181248-55209456 protein_coding
ENST00000376350 (PTPRH-001) 55181248-55209456 protein_coding
ENST00000586310 (PTPRH-008) 55205392-55207239 processed_transcript
ENST00000586852 (PTPRH-007) 55203992-55207254 processed_transcript
ENST00000587662 (PTPRH-004) 55205502-55209500 processed_transcript
ENST00000588370 (PTPRH-005) 55205404-55207270 processed_transcript
ENST00000588559 (PTPRH-003) 55194014-55209506 processed_transcript
ENSG00000267649 (CTD-2587H24.10)
ENST00000585911 (CTD-2587H24.10-001) 55216660-55221616 lincRNA
ENST00000591484 (CTD-2587H24.10-002) 55216682-55217429 lincRNA
CIL_0004TC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035429-ENSMUSG00000045282 CGP 10090 7:4548612-4630482
GeneTranscriptPositionBiotype
ENSMUSG00000035429 (Ptprh)
protein tyrosine phosphatase, receptor type, H
ENSMUST00000049113 (Ptprh-201) 4548612-4603141 protein_coding
ENSMUST00000166650 (Ptprh-202) 4548614-4604041 protein_coding
ENSMUSG00000045282 (Tmem86b)
transmembrane protein 86B
ENSMUST00000055085 (Tmem86b-201) 4628042-4630482 protein_coding
ENSMUSG00000077138 (Gm23577)
predicted gene, 23577
ENSMUST00000103950 (Gm23577-201) 4580069-4580178 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TC_0001ENSG00000080031ENST00000263434ENST00000376350ENST00000586310ENST00000586852ENST00000587662ENST00000588370ENST00000588559ENSG00000267649ENST00000585911ENST00000591484CIL_0004TC_0002ENSMUSG00000035429ENSMUST00000049113ENSMUST00000166650ENSMUSG00000045282ENSMUST00000055085ENSMUSG00000077138ENSMUST00000103950
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004TC_0001ENSG00000080031ENST00000263434ENST00000376350ENST00000586310ENST00000586852ENST00000587662ENST00000588370ENST00000588559ENSG00000267649ENST00000585911ENST00000591484CIL_0004TC_0002ENSMUSG00000035429ENSMUST00000049113ENSMUST00000166650ENSMUSG00000045282ENSMUST00000055085ENSMUSG00000077138ENSMUST00000103950
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080031 ENST00000263434 0.157±0.00 0.035±0.00 N/A N/A 0.113±0.00 0.817±0.00 N/A 0.096±0.00 0.957±0.00 0.077±0.00 0.057±0.00 0.770±0.47 N/A N/A
ENST00000376350 0.022±0.00 N/A N/A 0.867±0.00 N/A 0.670±0.02 0.135±0.00 N/A N/A N/A N/A 0.377±0.00 0.082±0.03 0.165±0.00
ENST00000586310 N/A N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586852 0.118±0.00 N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A 0.214±0.00 N/A
ENST00000587662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A
ENST00000588370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.642±0.00 N/A N/A
ENST00000588559 N/A 0.095±0.00 N/A N/A N/A N/A 0.058±0.00 0.029±0.00 0.035±0.00 0.089±0.00 N/A N/A 0.056±0.01 N/A
ENSG00000267649 ENST00000585911 N/A 0.030±0.00 0.086±0.00 0.015±0.00 0.030±0.00 N/A 0.016±0.00 N/A N/A N/A N/A 0.106±0.06 0.027±0.00 0.143±0.00
ENST00000591484 N/A 0.249±0.00 0.099±0.00 0.450±0.29 0.447±0.26 0.590±0.00 N/A N/A 0.098±0.02 N/A N/A 0.180±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035429 ENSMUST00000049113 0.064±0.06 0.016±0.00 0.005±0.00 N/A 0.018±0.01 28.655±3.82 0.021±0.01 0.081±0.04 0.015±0.01 0.074±0.00 0.012±0.00 0.106±0.05 0.029±0.01 0.242±0.07
ENSMUST00000166650 0.007±0.00 N/A N/A N/A N/A 2.987±0.14 N/A 0.071±0.01 0.006±0.00 0.034±0.00 N/A 0.084±0.03 0.102±0.00 0.248±0.08
ENSMUSG00000045282 ENSMUST00000055085 0.880±0.24 3.988±3.00 5.726±0.98 6.228±5.20 2.531±1.93 3.091±1.09 1.527±0.46 25.887±5.30 108.461±78.73 3.086±1.34 0.385±0.13 2.660±1.93 4.115±4.71 14.026±6.75
ENSMUSG00000077138 ENSMUST00000103950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1461.800±0.00

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