C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, H
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000080031 PTPRH 9606 - 19:55181248-55209506 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263434 PTPRH-002 55181248-55209456 protein_coding
  ENST00000376350 PTPRH-001 55181248-55209456 protein_coding
  ENST00000586310 PTPRH-008 55205392-55207239 processed_transcript
  ENST00000586852 PTPRH-007 55203992-55207254 processed_transcript
  ENST00000587662 PTPRH-004 55205502-55209500 processed_transcript
  ENST00000588370 PTPRH-005 55205404-55207270 processed_transcript
  ENST00000588559 PTPRH-003 55194014-55209506 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263434ENST00000376350ENST00000586310ENST00000586852ENST00000587662ENST00000588370ENST00000588559
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263434 0.157±0.00 0.035±0.00 N/A 0.113±0.00 0.817±0.00 N/A 0.096±0.00 0.957±0.00 0.077±0.00 0.057±0.00 0.770±0.47 N/A N/A
ENST00000376350 0.022±0.00 N/A 0.867±0.00 N/A 0.670±0.02 0.135±0.00 N/A N/A N/A N/A 0.377±0.00 0.082±0.03 0.165±0.00
ENST00000586310 N/A N/A N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586852 0.118±0.00 N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A 0.214±0.00 N/A
ENST00000587662 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A
ENST00000588370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.642±0.00 N/A N/A
ENST00000588559 N/A 0.095±0.00 N/A N/A N/A 0.058±0.00 0.029±0.00 0.035±0.00 0.089±0.00 N/A N/A 0.056±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TB CIL_0004TB_0001 CGP 19:55171199-55209506
CIL_0004TC CIL_0004TC_0001 CGP 19:55181248-55229264

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005001 IEA transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 IPI:IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005887 TAS integral component of plasma membrane
GO:0006470 TAS:IEA protein dephosphorylation
GO:0006915 IEA apoptotic process
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078297 ptprh protein tyrosine phosphatase, receptor type, h protein_coding Danio_rerio
ENSDARG00000079560 ptprh protein tyrosine phosphatase, receptor type, h protein_coding Danio_rerio
ENSMUSG00000035429 Ptprh protein tyrosine phosphatase, receptor type, H protein_coding Mus_musculus

Loading