C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164219-ENSG00000164221 CGP 9606 5:115210830-115296831
GeneTranscriptPositionBiotype
ENSG00000164221 (CCDC112)
coiled-coil domain containing 112 		ENST00000379611 (CCDC112-001) 115267188-115296831 protein_coding
ENST00000395557 (CCDC112-002) 115267639-115296268 protein_coding
ENST00000502975 (CCDC112-007) 115269599-115271610 retained_intron
ENST00000503027 (CCDC112-005) 115275339-115296623 processed_transcript
ENST00000506442 (CCDC112-004) 115267375-115296693 protein_coding
ENST00000512261 (CCDC112-003) 115267355-115296065 protein_coding
ENST00000513730 (CCDC112-006) 115275335-115277185 retained_intron
ENSG00000243304 (CTC-428G20.1)
 ENST00000497612 (CTC-428G20.1-001) 115264669-115265464 processed_pseudogene
ENSG00000250197 (HMGN1P15)
high mobility group nucleosome binding domain 1 pseudogene 15 		ENST00000513870 (HMGN1P15-001) 115289036-115289330 processed_pseudogene
CIL_0004UK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024477-ENSMUSG00000071855 CGP 10090 18:46239949-46311928
GeneTranscriptPositionBiotype
ENSMUSG00000024477 (Pggt1b)
protein geranylgeranyltransferase type I, beta subunit 		ENSMUST00000025354 (Pggt1b-201) 46239949-46280850 protein_coding
ENSMUSG00000071855 (Ccdc112)
coiled-coil domain containing 112 		ENSMUST00000072835 (Ccdc112-201) 46282151-46311928 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UK_0001ENSG00000164221ENST00000379611ENST00000395557ENST00000502975ENST00000503027ENST00000506442ENST00000512261ENST00000513730ENSG00000243304ENST00000497612ENSG00000250197ENST00000513870CIL_0004UK_0002ENSMUSG00000024477ENSMUST00000025354ENSMUSG00000071855ENSMUST00000072835
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UK_0001ENSG00000164221ENST00000379611ENST00000395557ENST00000502975ENST00000503027ENST00000506442ENST00000512261ENST00000513730ENSG00000243304ENST00000497612ENSG00000250197ENST00000513870CIL_0004UK_0002ENSMUSG00000024477ENSMUST00000025354ENSMUSG00000071855ENSMUST00000072835
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164221 ENST00000379611 0.190±0.00 N/A N/A 1.090±0.82 0.768±0.23 N/A 0.173±0.04 N/A 0.402±0.00 N/A N/A 0.899±0.46 0.407±0.35 4.125±0.00
ENST00000395557 0.410±0.00 0.247±0.00 N/A 0.207±0.00 0.568±0.00 0.938±0.00 0.249±0.15 N/A 0.133±0.00 N/A 0.348±0.00 1.404±1.02 0.165±0.05 18.244±9.89
ENST00000502975 N/A N/A N/A N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A N/A
ENST00000503027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 0.605±0.00 N/A N/A
ENST00000506442 0.347±0.00 0.894±0.00 0.203±0.00 1.412±0.53 0.879±0.00 1.301±0.76 0.350±0.29 0.564±0.51 0.268±0.00 0.751±0.09 N/A 0.645±0.05 0.235±0.09 4.528±0.00
ENST00000512261 N/A 0.252±0.00 N/A N/A N/A N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A
ENST00000513730 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.442±0.00 0.414±0.00 1.007±0.00 N/A N/A
ENSG00000243304 ENST00000497612 0.053±0.00 0.339±0.00 N/A 0.064±0.00 0.245±0.21 N/A 0.051±0.00 0.029±0.00 N/A N/A 0.048±0.00 0.147±0.09 0.100±0.02 0.452±0.00
ENSG00000250197 ENST00000513870 N/A 0.135±0.00 N/A 0.173±0.00 N/A 1.257±0.00 N/A N/A N/A N/A N/A 0.491±0.00 0.047±0.00 0.312±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024477 ENSMUST00000025354 1.877±0.53 3.359±0.83 N/A 2.396±0.97 3.114±1.43 4.843±1.25 0.893±0.17 2.116±0.57 1.312±0.38 5.617±2.33 N/A 3.530±1.01 2.987±0.89 1.400±0.53
ENSMUSG00000071855 ENSMUST00000072835 0.124±0.10 0.229±0.04 1.357±0.24 3.982±2.94 0.221±0.11 0.158±0.06 0.078±0.03 0.178±0.05 0.163±0.13 0.361±0.14 0.127±0.03 1.134±1.49 3.219±2.23 2.592±3.22

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