C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186732-ENSG00000186976 CGP 9606 22:43411196-43812337
GeneTranscriptPositionBiotype
ENSG00000186976 (EFCAB6)
EF-hand calcium binding domain 6 		ENST00000262726 (EFCAB6-010) 43528744-43812277 protein_coding
ENST00000356087 (EFCAB6-003) 43716671-43812305 protein_coding
ENST00000396231 (EFCAB6-001) 43528744-43812190 protein_coding
ENST00000404038 (EFCAB6-002) 43683664-43812337 retained_intron
ENST00000461800 (EFCAB6-005) 43528744-43570143 processed_transcript
ENST00000468552 (EFCAB6-004) 43551846-43672270 retained_intron
ENST00000476600 (EFCAB6-007) 43765305-43812253 processed_transcript
ENST00000477145 (EFCAB6-009) 43528780-43532061 processed_transcript
ENST00000483324 (EFCAB6-008) 43528778-43533505 processed_transcript
ENST00000485142 (EFCAB6-006) 43782210-43812274 processed_transcript
ENSG00000223843 (EFCAB6-AS1)
EFCAB6 antisense RNA 1 		ENST00000431327 (EFCAB6-AS1-001) 43516117-43536867 antisense
ENSG00000233157 (RP3-388M5.8)
 ENST00000419730 (RP3-388M5.8-001) 43759199-43759910 processed_pseudogene
CIL_0004UU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041708-ENSMUSG00000022441 CGP 10090 15:83779467-84065379
GeneTranscriptPositionBiotype
ENSMUSG00000041708 (Mpped1)
metallophosphoesterase domain containing 1 		ENSMUST00000046168 (Mpped1-003) 83780023-83858484 protein_coding
ENSMUST00000109469 (Mpped1-004) 83779467-83792131 protein_coding
ENSMUST00000109470 (Mpped1-001) 83784829-83858484 protein_coding
ENSMUST00000123387 (Mpped1-002) 83788880-83858494 nonsense_mediated_decay
ENSMUST00000125739 (Mpped1-006) 83836007-83856315 protein_coding
ENSMUST00000148868 (Mpped1-007) 83836040-83854523 protein_coding
ENSMUST00000150489 (Mpped1-005) 83796582-83852077 protein_coding
ENSMUST00000163723 (Mpped1-008) 83779982-83856729 protein_coding
ENSMUST00000171560 (Mpped1-010) 83800030-83856295 nonsense_mediated_decay
ENSMUST00000172115 (Mpped1-009) 83791939-83856314 protein_coding
ENSMUST00000172398 (Mpped1-011) 83792014-83856410 protein_coding
ENSMUSG00000081925 (Rpl31-ps22)
ribosomal protein L31, pseudogene 22 		ENSMUST00000117961 (Rpl31-ps22-001) 84030339-84030675 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UU_0001ENSG00000186976ENST00000262726ENST00000356087ENST00000396231ENST00000404038ENST00000461800ENST00000468552ENST00000476600ENST00000477145ENST00000483324ENST00000485142ENSG00000223843ENST00000431327ENSG00000233157ENST00000419730CIL_0004UU_0002ENSMUSG00000041708ENSMUST00000046168ENSMUST00000109469ENSMUST00000109470ENSMUST00000123387ENSMUST00000125739ENSMUST00000148868ENSMUST00000150489ENSMUST00000163723ENSMUST00000171560ENSMUST00000172115ENSMUST00000172398ENSMUSG00000081925ENSMUST00000117961
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UU_0001ENSG00000186976ENST00000262726ENST00000356087ENST00000396231ENST00000404038ENST00000461800ENST00000468552ENST00000477145ENSG00000223843ENST00000431327ENSG00000233157ENST00000419730CIL_0004UU_0002ENSMUSG00000041708ENSMUST00000046168ENSMUST00000109470ENSMUST00000123387ENSMUST00000125739ENSMUST00000148868ENSMUST00000163723ENSMUST00000172398ENSMUSG00000081925ENSMUST00000117961
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000186976 ENST00000262726 N/A N/A N/A 0.120±0.00 N/A 0.120±0.00 0.099±0.00 N/A N/A 0.527±0.00 N/A 0.282±0.00 N/A 7.616±2.44
ENST00000356087 N/A N/A N/A N/A 0.513±0.00 N/A 0.211±0.00 N/A N/A N/A N/A 0.551±0.00 0.121±0.00 N/A
ENST00000396231 0.044±0.00 N/A N/A 0.662±0.49 0.190±0.00 0.207±0.00 0.036±0.00 0.178±0.00 N/A N/A 0.008±0.00 0.479±0.26 0.040±0.01 14.005±8.93
ENST00000404038 N/A N/A N/A 0.804±0.42 0.190±0.00 N/A N/A N/A N/A 0.974±0.00 N/A 0.055±0.00 N/A N/A
ENST00000461800 N/A N/A N/A N/A N/A N/A N/A 0.316±0.00 0.066±0.00 N/A 0.083±0.00 0.858±0.00 0.022±0.00 17.554±5.42
ENST00000468552 N/A 0.113±0.00 0.073±0.00 0.136±0.00 0.134±0.01 0.035±0.00 0.058±0.00 N/A 0.023±0.00 0.112±0.00 0.018±0.00 0.064±0.00 N/A N/A
ENST00000476600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477145 N/A N/A N/A N/A N/A 0.462±0.00 N/A N/A N/A N/A N/A N/A 0.156±0.04 N/A
ENST00000483324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223843 ENST00000431327 N/A 0.076±0.00 N/A 0.161±0.00 N/A N/A N/A 0.095±0.00 0.038±0.00 N/A N/A N/A N/A N/A
ENSG00000233157 ENST00000419730 N/A N/A N/A 0.363±0.00 N/A N/A 0.036±0.01 N/A N/A 0.472±0.00 N/A 0.087±0.05 N/A 0.779±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041708 ENSMUST00000046168 N/A N/A N/A 22.618±13.91 N/A N/A N/A N/A 0.245±0.00 N/A N/A N/A N/A 1.197±0.62
ENSMUST00000109469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.07 N/A 1.571±0.00
ENSMUST00000123387 0.020±0.01 N/A 0.012±0.00 N/A N/A 0.014±0.00 0.008±0.00 N/A 0.010±0.01 N/A N/A 0.201±0.12 0.007±0.00 N/A
ENSMUST00000125739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.696±0.09 N/A N/A
ENSMUST00000148868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.334±0.10 N/A N/A
ENSMUST00000150489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163723 N/A 0.078±0.00 N/A N/A 0.058±0.00 N/A N/A N/A 0.056±0.02 N/A N/A 0.335±0.14 0.037±0.02 N/A
ENSMUST00000171560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172398 N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 0.045±0.00 N/A N/A N/A 0.042±0.00 0.651±0.00
ENSMUSG00000081925 ENSMUST00000117961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.501±0.42

Loading