C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186976-ENSG00000130540 CGP 9606 22:43528744-43862503
GeneTranscriptPositionBiotype
ENSG00000130540 (SULT4A1)
sulfotransferase family 4A, member 1 		ENST00000330884 (SULT4A1-001) 43824509-43862503 protein_coding
ENST00000422525 (SULT4A1-002) 43824510-43862470 nonsense_mediated_decay
ENST00000432404 (SULT4A1-003) 43824510-43862406 nonsense_mediated_decay
ENST00000475131 (SULT4A1-004) 43828806-43838913 retained_intron
ENSG00000186976 (EFCAB6)
EF-hand calcium binding domain 6 		ENST00000262726 (EFCAB6-010) 43528744-43812277 protein_coding
ENST00000356087 (EFCAB6-003) 43716671-43812305 protein_coding
ENST00000396231 (EFCAB6-001) 43528744-43812190 protein_coding
ENST00000404038 (EFCAB6-002) 43683664-43812337 retained_intron
ENST00000461800 (EFCAB6-005) 43528744-43570143 processed_transcript
ENST00000468552 (EFCAB6-004) 43551846-43672270 retained_intron
ENST00000476600 (EFCAB6-007) 43765305-43812253 processed_transcript
ENST00000477145 (EFCAB6-009) 43528780-43532061 processed_transcript
ENST00000483324 (EFCAB6-008) 43528778-43533505 processed_transcript
ENST00000485142 (EFCAB6-006) 43782210-43812274 processed_transcript
ENSG00000223843 (EFCAB6-AS1)
EFCAB6 antisense RNA 1 		ENST00000431327 (EFCAB6-AS1-001) 43516117-43536867 antisense
ENSG00000233157 (RP3-388M5.8)
 ENST00000419730 (RP3-388M5.8-001) 43759199-43759910 processed_pseudogene
ENSG00000261251 (RP3-388M5.9)
 ENST00000563715 (RP3-388M5.9-002) 43812456-43817394 antisense
ENST00000564696 (RP3-388M5.9-001) 43812493-43813955 antisense
CIL_0004UV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022441-ENSMUSG00000018865 CGP 10090 15:83866712-84105754
GeneTranscriptPositionBiotype
ENSMUSG00000018865 (Sult4a1)
sulfotransferase family 4A, member 1 		ENSMUST00000082365 (Sult4a1-201) 84076097-84105754 protein_coding
ENSMUSG00000081925 (Rpl31-ps22)
ribosomal protein L31, pseudogene 22 		ENSMUST00000117961 (Rpl31-ps22-001) 84030339-84030675 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UV_0001ENSG00000130540ENST00000330884ENST00000422525ENST00000432404ENST00000475131ENSG00000186976ENST00000262726ENST00000356087ENST00000396231ENST00000404038ENST00000461800ENST00000468552ENST00000476600ENST00000477145ENST00000483324ENST00000485142ENSG00000223843ENST00000431327ENSG00000233157ENST00000419730ENSG00000261251ENST00000563715ENST00000564696CIL_0004UV_0002ENSMUSG00000018865ENSMUST00000082365ENSMUSG00000081925ENSMUST00000117961
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UV_0001ENSG00000130540ENST00000330884ENST00000422525ENST00000432404ENST00000475131ENSG00000186976ENST00000262726ENST00000356087ENST00000396231ENST00000404038ENST00000461800ENST00000468552ENST00000477145ENSG00000223843ENST00000431327ENSG00000233157ENST00000419730ENSG00000261251ENST00000563715ENST00000564696CIL_0004UV_0002ENSMUSG00000018865ENSMUST00000082365ENSMUSG00000081925ENSMUST00000117961
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130540 ENST00000330884 N/A N/A N/A 38.992±20.69 N/A 1.633±0.00 N/A N/A N/A N/A N/A N/A N/A 1.036±0.00
ENST00000422525 N/A N/A N/A N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A 1.122±0.01 0.137±0.00 2.015±1.07
ENST00000432404 0.030±0.00 0.008±0.00 N/A 25.673±6.51 0.154±0.06 0.124±0.00 0.041±0.00 0.026±0.00 0.014±0.00 0.142±0.00 0.040±0.00 0.402±0.29 0.038±0.01 N/A
ENST00000475131 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.280±0.00 N/A N/A 0.222±0.00 N/A
ENSG00000186976 ENST00000262726 N/A N/A N/A 0.120±0.00 N/A 0.120±0.00 0.099±0.00 N/A N/A 0.527±0.00 N/A 0.282±0.00 N/A 7.616±2.44
ENST00000356087 N/A N/A N/A N/A 0.513±0.00 N/A 0.211±0.00 N/A N/A N/A N/A 0.551±0.00 0.121±0.00 N/A
ENST00000396231 0.044±0.00 N/A N/A 0.662±0.49 0.190±0.00 0.207±0.00 0.036±0.00 0.178±0.00 N/A N/A 0.008±0.00 0.479±0.26 0.040±0.01 14.005±8.93
ENST00000404038 N/A N/A N/A 0.804±0.42 0.190±0.00 N/A N/A N/A N/A 0.974±0.00 N/A 0.055±0.00 N/A N/A
ENST00000461800 N/A N/A N/A N/A N/A N/A N/A 0.316±0.00 0.066±0.00 N/A 0.083±0.00 0.858±0.00 0.022±0.00 17.554±5.42
ENST00000468552 N/A 0.113±0.00 0.073±0.00 0.136±0.00 0.134±0.01 0.035±0.00 0.058±0.00 N/A 0.023±0.00 0.112±0.00 0.018±0.00 0.064±0.00 N/A N/A
ENST00000476600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477145 N/A N/A N/A N/A N/A 0.462±0.00 N/A N/A N/A N/A N/A N/A 0.156±0.04 N/A
ENST00000483324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223843 ENST00000431327 N/A 0.076±0.00 N/A 0.161±0.00 N/A N/A N/A 0.095±0.00 0.038±0.00 N/A N/A N/A N/A N/A
ENSG00000233157 ENST00000419730 N/A N/A N/A 0.363±0.00 N/A N/A 0.036±0.01 N/A N/A 0.472±0.00 N/A 0.087±0.05 N/A 0.779±0.00
ENSG00000261251 ENST00000563715 N/A 0.020±0.00 N/A 0.214±0.00 0.040±0.00 0.092±0.00 0.056±0.00 N/A N/A 0.157±0.00 N/A 0.102±0.06 0.063±0.00 0.948±0.13
ENST00000564696 0.042±0.00 0.074±0.00 0.329±0.00 0.157±0.13 N/A N/A 0.085±0.06 0.106±0.00 0.070±0.02 0.148±0.00 N/A 0.192±0.17 N/A 0.353±0.18
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018865 ENSMUST00000082365 0.077±0.04 2.542±0.46 0.254±0.04 83.081±80.97 0.016±0.00 2.387±0.13 0.319±0.04 0.450±0.20 0.046±0.04 0.200±0.06 0.027±0.00 0.429±0.18 0.203±0.10 1.642±0.45
ENSMUSG00000081925 ENSMUST00000117961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.501±0.42

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