C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004V7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076735-ENSDARG00000067713 CGP 7955 5:41850067-41917429
GeneTranscriptPositionBiotype
ENSDARG00000067713 (snx18a)
sorting nexin 18a 		ENSDART00000097525 (snx18a-001) 41897978-41917429 protein_coding
ENSDARG00000076735 (si:dkey-193c22.2)
si:dkey-193c22.2 		ENSDART00000114078 (si:dkey-193c22.2-201) 41850067-41874136 protein_coding
ENSDART00000142897 (si:dkey-193c22.2-001) 41850068-41874136 protein_coding
CIL_0004V7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021763-ENSMUSG00000042364 CGP 10090 13:113317084-113618564
GeneTranscriptPositionBiotype
ENSMUSG00000021763 (BC067074)
cDNA sequence BC067074 		ENSMUST00000078163 (BC067074-201) 113342548-113370512 protein_coding
ENSMUST00000135096 (BC067074-002) 113351603-113379711 protein_coding
ENSMUST00000136755 (BC067074-001) 113317084-113370515 protein_coding
ENSMUSG00000042364 (Snx18)
sorting nexin 18 		ENSMUST00000109241 (Snx18-201) 113592180-113618564 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004V7_0001ENSDARG00000067713ENSDART00000097525ENSDARG00000076735ENSDART00000114078ENSDART00000142897CIL_0004V7_0002ENSMUSG00000021763ENSMUST00000078163ENSMUST00000135096ENSMUST00000136755ENSMUSG00000042364ENSMUST00000109241
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004V7_0001ENSDARG00000067713ENSDART00000097525ENSDARG00000076735ENSDART00000114078ENSDART00000142897CIL_0004V7_0002ENSMUSG00000021763ENSMUST00000078163ENSMUST00000136755ENSMUSG00000042364ENSMUST00000109241
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000067713 ENSDART00000097525 N/A N/A N/A 2.955±3.75 N/A N/A 5.267±5.85 4.675±4.64 0.786±0.00 N/A 13.445±0.00 N/A N/A N/A
ENSDARG00000076735 ENSDART00000114078 N/A N/A N/A N/A N/A N/A N/A 0.615±0.00 0.044±0.00 N/A N/A N/A N/A N/A
ENSDART00000142897 N/A N/A N/A 0.176±0.05 N/A N/A N/A 0.411±0.00 N/A N/A 0.174±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021763 ENSMUST00000078163 1.040±0.20 0.205±0.03 0.652±0.14 0.219±0.13 0.878±0.34 0.193±0.05 0.284±0.07 2.344±0.55 0.126±0.06 0.830±0.22 0.156±0.09 1.014±0.35 0.293±0.26 0.048±0.03
ENSMUST00000135096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136755 2.241±0.88 0.233±0.06 0.207±0.00 0.278±0.05 1.167±0.14 0.086±0.04 0.363±0.07 1.524±0.81 0.060±0.04 1.562±0.39 0.185±0.08 1.105±0.44 0.334±0.29 0.073±0.03
ENSMUSG00000042364 ENSMUST00000109241 13.382±3.74 13.361±1.92 13.691±3.21 3.434±1.07 13.646±4.67 5.757±2.18 4.882±0.59 12.939±0.66 4.117±0.62 15.458±1.82 2.415±0.26 28.843±11.26 8.917±3.09 1.171±0.48

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