C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000504_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088709-ENSDARG00000041348 CGP 7955 18:37959757-38073637
GeneTranscriptPositionBiotype
ENSDARG00000041348 (cyp19a1a)
cytochrome P450, family 19, subfamily A, polypeptide 1a 		ENSDART00000129828 (cyp19a1a-001) 38057824-38073637 protein_coding
ENSDARG00000085955 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000121355 (5S_rRNA.1441-201) 38053064-38053194 rRNA
ENSDARG00000088709 (tnfaip8l3)
tumor necrosis factor, alpha-induced protein 8-like 3 		ENSDART00000125116 (tnfaip8l3-001) 37959757-38020890 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000504_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183578-ENSG00000137869 CGP 9606 15:51056598-51338610
GeneTranscriptPositionBiotype
ENSG00000137869 (CYP19A1)
cytochrome P450, family 19, subfamily A, polypeptide 1 		ENST00000260433 (CYP19A1-201) 51208058-51323924 protein_coding
ENST00000396402 (CYP19A1-001) 51208057-51338610 protein_coding
ENST00000396404 (CYP19A1-007) 51210181-51338596 protein_coding
ENST00000405011 (CYP19A1-013) 51222479-51338597 protein_coding
ENST00000405913 (CYP19A1-004) 51221379-51243011 protein_coding
ENST00000439712 (CYP19A1-011) 51212527-51338598 non_stop_decay
ENST00000453807 (CYP19A1-008) 51218558-51338601 protein_coding
ENST00000478421 (CYP19A1-006) 51215787-51218548 processed_transcript
ENST00000490076 (CYP19A1-005) 51210981-51215987 retained_intron
ENST00000492852 (CYP19A1-003) 51312227-51338581 processed_transcript
ENST00000557858 (CYP19A1-016) 51222264-51338575 protein_coding
ENST00000557934 (CYP19A1-009) 51212527-51338596 non_stop_decay
ENST00000558066 (CYP19A1-019) 51215032-51222354 retained_intron
ENST00000558328 (CYP19A1-015) 51215711-51338580 protein_coding
ENST00000559646 (CYP19A1-012) 51222483-51318492 protein_coding
ENST00000559653 (CYP19A1-020) 51212259-51215224 protein_coding
ENST00000559878 (CYP19A1-014) 51210514-51243064 protein_coding
ENST00000559980 (CYP19A1-002) 51222461-51338598 protein_coding
ENST00000561066 (CYP19A1-018) 51277136-51278160 processed_transcript
ENST00000561075 (CYP19A1-017) 51215182-51338596 protein_coding
ENST00000613097 (CYP19A1-202) 51215787-51218548 protein_coding
ENSG00000183578 (TNFAIP8L3)
tumor necrosis factor, alpha-induced protein 8-like 3 		ENST00000327536 (TNFAIP8L3-001) 51056598-51105276 protein_coding
ENSG00000259204 (RP11-394B5.2)
 ENST00000558938 (RP11-394B5.2-001) 51064609-51069586 sense_intronic
ENSG00000259240 (RP11-108K3.1)
 ENST00000559909 (RP11-108K3.1-001) 51037488-51293912 lincRNA
ENSG00000259306 (RP11-108K3.2)
 ENST00000559672 (RP11-108K3.2-001) 51315841-51321996 lincRNA
ENSG00000259701 (RP11-108K3.3)
 ENST00000560011 (RP11-108K3.3-001) 51278927-51280015 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_000504_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074345-ENSMUSG00000032274 CGP 10090 9:54025606-54193442
GeneTranscriptPositionBiotype
ENSMUSG00000032274 (Cyp19a1)
cytochrome P450, family 19, subfamily a, polypeptide 1 		ENSMUST00000034811 (Cyp19a1-201) 54165937-54193442 protein_coding
ENSMUSG00000074345 (Tnfaip8l3)
tumor necrosis factor, alpha-induced protein 8-like 3 		ENSMUST00000098760 (Tnfaip8l3-201) 54025606-54068411 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000504_0001ENSDARG00000041348ENSDART00000129828ENSDARG00000085955ENSDART00000121355ENSDARG00000088709ENSDART00000125116CIL_000504_0002ENSG00000137869ENST00000260433ENST00000396402ENST00000396404ENST00000405011ENST00000405913ENST00000439712ENST00000453807ENST00000478421ENST00000490076ENST00000492852ENST00000557858ENST00000557934ENST00000558066ENST00000558328ENST00000559646ENST00000559653ENST00000559878ENST00000559980ENST00000561066ENST00000561075ENST00000613097ENSG00000183578ENST00000327536ENSG00000259204ENST00000558938ENSG00000259240ENST00000559909ENSG00000259306ENST00000559672ENSG00000259701ENST00000560011CIL_000504_0003ENSMUSG00000032274ENSMUST00000034811ENSMUSG00000074345ENSMUST00000098760
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000504_0001ENSDARG00000041348ENSDART00000129828ENSDARG00000085955ENSDART00000121355ENSDARG00000088709ENSDART00000125116CIL_000504_0002ENSG00000137869ENST00000260433ENST00000396402ENST00000396404ENST00000492852ENST00000557858ENST00000557934ENST00000558066ENST00000559646ENST00000559878ENST00000561066ENST00000561075ENSG00000183578ENST00000327536ENSG00000259204ENST00000558938ENSG00000259240ENST00000559909ENSG00000259306ENST00000559672ENSG00000259701ENST00000560011CIL_000504_0003ENSMUSG00000032274ENSMUST00000034811ENSMUSG00000074345ENSMUST00000098760
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041348 ENSDART00000129828 N/A N/A N/A 0.444±0.30 N/A N/A 0.059±0.00 0.032±0.00 N/A N/A 0.194±0.00 N/A N/A N/A
ENSDARG00000085955 ENSDART00000121355 N/A N/A N/A 170.348±0.00 N/A N/A 0.916±0.00 209.934±0.00 0.870±0.00 N/A 6.418±0.00 N/A N/A N/A
ENSDARG00000088709 ENSDART00000125116 N/A N/A N/A 11.616±2.86 N/A N/A 3.738±1.72 19.184±3.80 0.061±0.00 N/A 1.647±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137869 ENST00000260433 N/A N/A N/A 0.009±0.00 N/A 0.133±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396402 N/A N/A N/A N/A 0.029±0.00 0.068±0.00 0.008±0.00 0.076±0.00 N/A N/A N/A 0.756±0.00 16.447±0.00 N/A
ENST00000396404 N/A 0.395±0.00 N/A N/A N/A 0.155±0.00 0.022±0.00 N/A N/A N/A N/A 4.047±0.00 N/A N/A
ENST00000405011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492852 N/A N/A N/A N/A N/A 0.253±0.00 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000557858 N/A N/A N/A 0.113±0.00 N/A N/A 0.260±0.00 N/A 0.223±0.00 N/A N/A N/A N/A N/A
ENST00000557934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.127±0.00 N/A
ENST00000558066 N/A N/A N/A N/A N/A N/A 0.089±0.00 0.274±0.00 N/A 0.211±0.00 N/A N/A 57.472±0.00 N/A
ENST00000558328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559646 N/A N/A N/A 0.250±0.20 N/A N/A 0.133±0.00 0.171±0.00 N/A 0.066±0.00 0.213±0.00 N/A N/A N/A
ENST00000559653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559878 N/A N/A N/A 0.026±0.00 0.038±0.00 N/A 0.037±0.00 N/A N/A N/A N/A 2.202±0.00 N/A N/A
ENST00000559980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.950±0.00
ENST00000561075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.220±0.00 N/A N/A N/A
ENST00000613097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183578 ENST00000327536 2.675±0.00 8.883±0.00 0.041±0.00 3.562±2.35 1.400±0.25 2.609±1.82 0.178±0.00 3.098±0.00 1.121±0.67 0.680±0.00 0.508±0.00 8.146±9.55 0.723±0.38 4.034±3.01
ENSG00000259204 ENST00000558938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00
ENSG00000259240 ENST00000559909 N/A N/A N/A 0.213±0.00 0.893±0.67 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259306 ENST00000559672 N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A 0.395±0.30
ENSG00000259701 ENST00000560011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.960±0.00 2.980±2.70 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032274 ENSMUST00000034811 N/A N/A N/A 0.104±0.07 N/A N/A N/A N/A N/A N/A N/A 8.865±2.66 0.002±0.00 0.921±0.68
ENSMUSG00000074345 ENSMUST00000098760 4.154±3.91 0.208±0.08 1.326±0.08 0.853±0.86 0.359±0.13 0.770±0.28 0.125±0.04 0.157±0.06 0.257±0.08 1.878±0.30 0.028±0.01 3.773±2.67 0.772±1.28 0.048±0.04

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