C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00051R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000009196-ENSDARG00000020009 CGP 7955 5:40687821-40744057
GeneTranscriptPositionBiotype
ENSDARG00000009196 (anxa3a)
annexin A3a 		ENSDART00000004286 (anxa3a-001) 40687821-40696080 protein_coding
ENSDARG00000020009 (bmp2k)
BMP2 inducible kinase 		ENSDART00000006079 (bmp2k-001) 40699629-40744057 protein_coding
ENSDARG00000094754 (si:ch211-191a6.3)
si:ch211-191a6.3 		ENSDART00000131725 (si:ch211-191a6.3-001) 40743313-40752395 processed_transcript
CIL_00051R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138772-ENSG00000138756 CGP 9606 4:78551519-78916372
GeneTranscriptPositionBiotype
ENSG00000138756 (BMP2K)
BMP2 inducible kinase 		ENST00000335016 (BMP2K-201) 78776378-78912185 protein_coding
ENST00000389010 (BMP2K-002) 78776342-78879435 nonsense_mediated_decay
ENST00000502613 (BMP2K-003) 78859624-78916372 protein_coding
ENST00000502871 (BMP2K-001) 78776378-78879969 protein_coding
ENST00000505725 (BMP2K-005) 78850892-78865773 retained_intron
ENST00000507670 (BMP2K-004) 78872328-78879432 retained_intron
ENST00000515075 (BMP2K-006) 78859167-78861469 retained_intron
ENSG00000138772 (ANXA3)
annexin A3 		ENST00000264908 (ANXA3-001) 78551519-78610421 protein_coding
ENST00000503570 (ANXA3-003) 78551758-78610386 protein_coding
ENST00000503776 (ANXA3-004) 78601864-78610451 retained_intron
ENST00000505805 (ANXA3-010) 78597073-78610363 retained_intron
ENST00000508214 (ANXA3-007) 78553920-78586350 protein_coding
ENST00000510502 (ANXA3-009) 78551770-78582421 retained_intron
ENST00000512373 (ANXA3-005) 78551827-78582291 protein_coding
ENST00000512542 (ANXA3-008) 78551757-78595887 protein_coding
ENST00000512884 (ANXA3-002) 78551747-78610415 protein_coding
ENST00000514171 (ANXA3-006) 78551967-78591603 protein_coding
ENSG00000239793 (RP11-109G23.1)
 ENST00000478593 (RP11-109G23.1-001) 78768499-78768750 processed_pseudogene
ENSG00000242175 (RN7SL127P)
RNA, 7SL, cytoplasmic 127, pseudogene 		ENST00000494856 (RN7SL127P-201) 78898855-78899154 misc_RNA
ENSG00000251442 (LINC01094)
long intergenic non-protein coding RNA 1094 		ENST00000503259 (LINC01094-005) 78645903-78663304 lincRNA
ENST00000503539 (LINC01094-003) 78646184-78682663 lincRNA
ENST00000504675 (LINC01094-004) 78646186-78682392 lincRNA
ENST00000507802 (LINC01094-007) 78645994-78680895 lincRNA
ENST00000512322 (LINC01094-001) 78646217-78682699 lincRNA
ENST00000514130 (LINC01094-006) 78646089-78663144 lincRNA
ENSG00000260278 (RP11-109G23.3)
 ENST00000564925 (RP11-109G23.3-001) 78773654-78775973 antisense
CIL_00051R_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029484-ENSMUSG00000034663 CGP 10090 5:96793385-97091867
GeneTranscriptPositionBiotype
ENSMUSG00000029484 (Anxa3)
annexin A3 		ENSMUST00000031447 (Anxa3-201) 96793385-96845968 protein_coding
ENSMUSG00000034663 (Bmp2k)
BMP2 inducible kinase 		ENSMUST00000035635 (Bmp2k-001) 96997689-97091867 protein_coding
ENSMUST00000112974 (Bmp2k-002) 96997689-97069649 protein_coding
ENSMUSG00000055725 (Paqr3)
progestin and adipoQ receptor family member III 		ENSMUST00000069453 (Paqr3-001) 97082329-97111596 protein_coding
ENSMUST00000112968 (Paqr3-003) 97102142-97111596 protein_coding
ENSMUST00000112969 (Paqr3-004) 97086980-97111573 protein_coding
ENSMUST00000126585 (Paqr3-005) 97095932-97097771 retained_intron
ENSMUST00000132127 (Paqr3-002) 97104580-97111584 retained_intron
ENSMUSG00000064550 (Gm24623)
predicted gene, 24623 		ENSMUST00000082616 (Gm24623-201) 96907632-96907825 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051R_0001ENSDARG00000009196ENSDART00000004286ENSDARG00000020009ENSDART00000006079ENSDARG00000094754ENSDART00000131725CIL_00051R_0002ENSG00000138756ENST00000335016ENST00000389010ENST00000502613ENST00000502871ENST00000505725ENST00000507670ENST00000515075ENSG00000138772ENST00000264908ENST00000503570ENST00000503776ENST00000505805ENST00000508214ENST00000510502ENST00000512373ENST00000512542ENST00000512884ENST00000514171ENSG00000239793ENST00000478593ENSG00000242175ENST00000494856ENSG00000251442ENST00000503259ENST00000503539ENST00000504675ENST00000507802ENST00000512322ENST00000514130ENSG00000260278ENST00000564925CIL_00051R_0003ENSMUSG00000029484ENSMUST00000031447ENSMUSG00000034663ENSMUST00000035635ENSMUST00000112974ENSMUSG00000055725ENSMUST00000069453ENSMUST00000112968ENSMUST00000112969ENSMUST00000126585ENSMUST00000132127ENSMUSG00000064550ENSMUST00000082616
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051R_0001ENSDARG00000009196ENSDART00000004286ENSDARG00000020009ENSDART00000006079ENSDARG00000094754ENSDART00000131725CIL_00051R_0002ENSG00000138756ENST00000335016ENST00000389010ENST00000507670ENSG00000138772ENST00000264908ENST00000503570ENST00000505805ENST00000508214ENST00000510502ENST00000512884ENSG00000239793ENST00000478593ENSG00000242175ENST00000494856ENSG00000251442ENST00000503259ENST00000503539ENST00000504675ENST00000507802ENST00000512322ENST00000514130ENSG00000260278ENST00000564925CIL_00051R_0003ENSMUSG00000029484ENSMUST00000031447ENSMUSG00000034663ENSMUST00000035635ENSMUST00000112974ENSMUSG00000055725ENSMUST00000069453ENSMUST00000112969ENSMUSG00000064550ENSMUST00000082616
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009196 ENSDART00000004286 N/A N/A N/A 0.110±0.05 N/A N/A 0.408±0.06 1.275±0.00 N/A N/A 0.276±0.00 N/A N/A N/A
ENSDARG00000020009 ENSDART00000006079 N/A N/A N/A 2.124±0.41 N/A N/A 4.807±1.41 N/A 0.749±0.00 N/A 1.828±0.00 N/A N/A N/A
ENSDARG00000094754 ENSDART00000131725 N/A N/A N/A 3.238±0.00 N/A N/A 3.732±0.00 N/A 0.426±0.00 N/A 1.162±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138756 ENST00000335016 N/A N/A 1.118±0.00 2.077±0.00 3.026±0.00 3.390±0.00 0.799±0.00 N/A 1.314±0.00 4.000±0.00 0.381±0.00 1.516±0.00 N/A 7.317±0.00
ENST00000389010 2.025±0.00 5.263±0.00 2.083±0.00 2.659±0.76 N/A 4.589±0.00 1.344±0.00 N/A 1.676±0.10 1.930±0.00 N/A 3.058±0.00 2.952±0.70 N/A
ENST00000502613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507670 N/A N/A N/A N/A N/A N/A N/A 3.019±0.00 N/A N/A 1.613±0.00 N/A N/A N/A
ENST00000515075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138772 ENST00000264908 8.200±0.00 0.961±0.00 N/A 0.475±0.30 6.255±3.35 2.155±0.40 5.566±3.95 6.041±0.00 0.292±0.20 19.856±11.16 1.372±0.30 11.272±5.58 35.490±6.69 N/A
ENST00000503570 N/A 1.311±0.00 N/A 2.492±0.00 N/A N/A N/A N/A N/A N/A N/A 24.815±0.00 20.921±0.00 0.827±0.63
ENST00000503776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505805 N/A N/A 0.648±0.00 N/A N/A N/A N/A 0.478±0.00 N/A N/A 3.524±0.00 1.064±0.00 N/A N/A
ENST00000508214 N/A N/A N/A N/A N/A N/A N/A N/A 1.566±0.00 N/A N/A N/A N/A N/A
ENST00000510502 N/A N/A 1.456±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512884 13.698±0.00 2.662±0.00 N/A 1.748±0.00 9.876±0.00 8.542±0.00 10.629±0.00 8.956±0.00 0.513±0.00 26.049±0.00 1.139±0.00 N/A N/A 0.774±0.13
ENST00000514171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239793 ENST00000478593 N/A N/A N/A 0.299±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.354±0.22
ENSG00000242175 ENST00000494856 N/A 0.257±0.00 N/A 0.352±0.00 0.510±0.44 0.693±0.00 N/A 0.132±0.00 N/A 1.589±0.00 N/A N/A N/A N/A
ENSG00000251442 ENST00000503259 N/A N/A N/A N/A N/A N/A N/A 0.512±0.00 N/A 0.639±0.00 N/A 0.176±0.08 N/A N/A
ENST00000503539 N/A N/A N/A 0.577±0.00 N/A 0.003±0.00 0.075±0.00 N/A 0.033±0.00 N/A N/A N/A 0.385±0.03 0.086±0.00
ENST00000504675 N/A N/A N/A 0.264±0.00 N/A N/A 0.115±0.00 N/A N/A N/A N/A 0.157±0.00 0.403±0.06 0.172±0.00
ENST00000507802 N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A 1.161±0.00 N/A N/A N/A 0.773±0.00 N/A
ENST00000512322 0.215±0.00 0.180±0.00 N/A 1.203±0.00 0.258±0.15 0.060±0.04 0.050±0.00 0.268±0.00 N/A N/A 0.153±0.00 0.145±0.00 0.419±0.05 N/A
ENST00000514130 N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A 0.050±0.00
ENSG00000260278 ENST00000564925 N/A 0.099±0.00 N/A 0.043±0.02 0.045±0.00 0.019±0.00 0.020±0.00 0.010±0.00 0.009±0.00 0.075±0.00 0.005±0.00 0.034±0.00 N/A 0.464±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029484 ENSMUST00000031447 13.835±1.87 1.763±0.33 33.943±10.23 3.124±0.47 13.571±3.53 21.505±3.30 7.385±0.85 6.934±0.85 3.550±2.79 50.387±8.72 4.162±0.98 16.981±11.01 53.152±28.19 2.625±0.78
ENSMUSG00000034663 ENSMUST00000035635 2.686±1.02 1.136±0.04 1.462±0.56 0.773±0.00 2.285±0.63 1.049±0.18 0.523±0.07 1.713±0.19 3.076±2.31 1.823±0.29 1.031±0.33 3.943±1.68 2.907±0.64 0.708±0.00
ENSMUST00000112974 5.477±2.13 12.316±1.20 1.756±0.22 3.951±2.22 12.111±5.29 6.749±0.64 0.938±0.25 6.300±1.02 5.442±4.56 8.940±0.58 0.398±0.00 26.199±13.62 3.175±1.03 14.154±7.60
ENSMUSG00000055725 ENSMUST00000069453 N/A 5.114±0.00 N/A N/A N/A N/A N/A N/A 2.666±0.69 N/A N/A N/A N/A N/A
ENSMUST00000112968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112969 4.381±1.76 6.238±0.81 6.042±0.76 8.036±3.46 6.253±1.70 2.953±0.31 1.661±0.21 3.565±0.54 3.501±1.21 5.449±1.82 1.887±0.38 11.748±2.67 3.702±0.23 5.779±0.50
ENSMUST00000126585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000064550 ENSMUST00000082616 N/A N/A N/A N/A N/A N/A 5.004±0.00 N/A N/A N/A N/A 1.225±0.00 1.046±0.86 N/A

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